Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is yrbA [C]
Identifier: 89255919
GI number: 89255919
Start: 496082
End: 496318
Strand: Reverse
Name: yrbA [C]
Synonym: FTL_0512
Alternate gene names: 89255919
Gene position: 496318-496082 (Counterclockwise)
Preceding gene: 89255920
Following gene: 89255914
Centisome position: 26.18
GC content: 28.69
Gene sequence:
>237_bases ATGACAAAGGAACAACTTAAGGATATCTTAGAGAATTCACTAAAAAACTGTAACGCGGATGTTCAAAGCGATAATAATGT ACATTTCTCAGCAACTATAATTGCCGAAGAATTTAATGATATGCCTAGTAAAGTTAAAAGGCAACAATTAGTATATTCAA AAATAAATAAATATATCCTTTCTGGAGAGTTACATGCTATAGCAATGAAAACTATAGCTACTAATGAAGTTAAATAA
Upstream 100 bases:
>100_bases GTATTTAAAAATATTGACCAAAAAACACTTTCTTTAGCAAAGGTGCATGGTGCTAAAACTATTTTAGAAGAATATATTAA TTAATATATCAGGAGAAAAA
Downstream 100 bases:
>100_bases GTCTAGATTTACAAATCATTAACATATAAGCAATTATCTTAAATCTAGTTTAAATTAGCTAAAATAGTTTCAAAACCTGA ATTTTCTAATATTATCGTAA
Product: BolA-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MTKEQLKDILENSLKNCNADVQSDNNVHFSATIIAEEFNDMPSKVKRQQLVYSKINKYILSGELHAIAMKTIATNEVK
Sequences:
>Translated_78_residues MTKEQLKDILENSLKNCNADVQSDNNVHFSATIIAEEFNDMPSKVKRQQLVYSKINKYILSGELHAIAMKTIATNEVK >Mature_77_residues TKEQLKDILENSLKNCNADVQSDNNVHFSATIIAEEFNDMPSKVKRQQLVYSKINKYILSGELHAIAMKTIATNEVK
Specific function: Unknown
COG id: COG5007
COG function: function code K; Predicted transcriptional regulator, BolA superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8854; Mature: 8723
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKEQLKDILENSLKNCNADVQSDNNVHFSATIIAEEFNDMPSKVKRQQLVYSKINKYIL CCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHH SGELHAIAMKTIATNEVK CCCHHHHHHHHHHCCCCC >Mature Secondary Structure TKEQLKDILENSLKNCNADVQSDNNVHFSATIIAEEFNDMPSKVKRQQLVYSKINKYIL CHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHH SGELHAIAMKTIATNEVK CCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA