Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
---|---|
Accession | NC_007802 |
Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is cycG [H]
Identifier: 89054719
GI number: 89054719
Start: 2234462
End: 2235361
Strand: Reverse
Name: cycG [H]
Synonym: Jann_2228
Alternate gene names: 89054719
Gene position: 2235361-2234462 (Counterclockwise)
Preceding gene: 89054720
Following gene: 89054718
Centisome position: 51.77
GC content: 64.56
Gene sequence:
>900_bases ATGCCACCCGTGATCCGTTGGATTGTGTTCCTTGGGGTCGTTGGGCTTGGGGCGGCGTGGTTTCTCAGCCGTCCCGACCA TATCTCCGAGGCCGACATTGTGGGGCTGTCCGGCGATGCGCAGGCCGGTGAGGCCGTCTTCTGGGCGGCTGGCTGCGCCT CATGTCACAGCCGCGAGGACGCGCAAGCGGAGGAGCGGCTGGTCCTGGCCGGAGGTCAGGCCTTTCCCAGCGATTTCGGC ACCTTCCGCGCGCCCAACATATCCTCCGATCCGACCCATGGCATCGGCGACTGGACCCTGGCGCAGTTTCTGACCGCGCT ACAAAACGGCGTCAGCCCCGACGGCCAGCAGTACTACCCGGCCTTCCCCTACACCGCTTACAGATTGGCAGATCGCCAGG ACCTCGCGGATCTCTTTGCTTTCATGCAAACGCTGCCCGCCTCCGATACACCATCCCTGCCCCATGATGTGGGCTTTCCC TTCAACATCCGCCGCACGGTCGGCCTCTGGAACCAGATGTTCCTGCACGATGATTTTGCGGTGACCTTCCCCCTGTCCGA TGACGCGCCCCAGGGCCGTTATCTGGCGGAGGCCCTGGGCCATTGCGCCGAATGCCACACGCCGCGCAACGCCTTGGGGG CCTTGGATCGCAGCCGCTGGATGCACGGCGCCCCCAATCCATCCGGGCGCGGCACGATCCCGGCCCTGACACCGGATCAG CTGGGTTGGGCGCGACAGGAAATCGCCGCGTATCTCAACGACGGGTTCACACCCGAATTTGACACCGCCGGAGGACATAT GCGCTCGGTCATCCAGAACCTCTCGCACCTGACAGAGGCTGACCGCCTAGCCATTGCCAGCTATTTACTGGCGTTGCCGC CGATGTCTGGTCGCCCCTAG
Upstream 100 bases:
>100_bases CGCAGTGGGCCCCGTTGGTGCGGTCTGCGGCGATTGCCACGAGGCGTTTCAGGAAGAGCGGTAAGGCCCCAAACGGGATC CAGAGTGAAGAGGATAATCC
Downstream 100 bases:
>100_bases GCGCGCGGTGATCTTTCCGCGTGCTTAACCGCACGGTAAGACCCTGGGTGCTAGGACAGCCGCGCAATCATCAAAGGCAC CCCCATGGCTGTTCCTGCCC
Product: diheme cytochrome c-type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MPPVIRWIVFLGVVGLGAAWFLSRPDHISEADIVGLSGDAQAGEAVFWAAGCASCHSREDAQAEERLVLAGGQAFPSDFG TFRAPNISSDPTHGIGDWTLAQFLTALQNGVSPDGQQYYPAFPYTAYRLADRQDLADLFAFMQTLPASDTPSLPHDVGFP FNIRRTVGLWNQMFLHDDFAVTFPLSDDAPQGRYLAEALGHCAECHTPRNALGALDRSRWMHGAPNPSGRGTIPALTPDQ LGWARQEIAAYLNDGFTPEFDTAGGHMRSVIQNLSHLTEADRLAIASYLLALPPMSGRP
Sequences:
>Translated_299_residues MPPVIRWIVFLGVVGLGAAWFLSRPDHISEADIVGLSGDAQAGEAVFWAAGCASCHSREDAQAEERLVLAGGQAFPSDFG TFRAPNISSDPTHGIGDWTLAQFLTALQNGVSPDGQQYYPAFPYTAYRLADRQDLADLFAFMQTLPASDTPSLPHDVGFP FNIRRTVGLWNQMFLHDDFAVTFPLSDDAPQGRYLAEALGHCAECHTPRNALGALDRSRWMHGAPNPSGRGTIPALTPDQ LGWARQEIAAYLNDGFTPEFDTAGGHMRSVIQNLSHLTEADRLAIASYLLALPPMSGRP >Mature_298_residues PPVIRWIVFLGVVGLGAAWFLSRPDHISEADIVGLSGDAQAGEAVFWAAGCASCHSREDAQAEERLVLAGGQAFPSDFGT FRAPNISSDPTHGIGDWTLAQFLTALQNGVSPDGQQYYPAFPYTAYRLADRQDLADLFAFMQTLPASDTPSLPHDVGFPF NIRRTVGLWNQMFLHDDFAVTFPLSDDAPQGRYLAEALGHCAECHTPRNALGALDRSRWMHGAPNPSGRGTIPALTPDQL GWARQEIAAYLNDGFTPEFDTAGGHMRSVIQNLSHLTEADRLAIASYLLALPPMSGRP
Specific function: Particularly expressed when cells generate energy via aerobic respiration [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 [H]
Pfam domain/function: PF00034 Cytochrom_C [H]
EC number: NA
Molecular weight: Translated: 32435; Mature: 32303
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPVIRWIVFLGVVGLGAAWFLSRPDHISEADIVGLSGDAQAGEAVFWAAGCASCHSRED CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEEEHHHHHHHCCCCH AQAEERLVLAGGQAFPSDFGTFRAPNISSDPTHGIGDWTLAQFLTALQNGVSPDGQQYYP HHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC AFPYTAYRLADRQDLADLFAFMQTLPASDTPSLPHDVGFPFNIRRTVGLWNQMFLHDDFA CCCCHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCEE VTFPLSDDAPQGRYLAEALGHCAECHTPRNALGALDRSRWMHGAPNPSGRGTIPALTPDQ EEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH LGWARQEIAAYLNDGFTPEFDTAGGHMRSVIQNLSHLTEADRLAIASYLLALPPMSGRP HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PPVIRWIVFLGVVGLGAAWFLSRPDHISEADIVGLSGDAQAGEAVFWAAGCASCHSRED CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEEEHHHHHHHCCCCH AQAEERLVLAGGQAFPSDFGTFRAPNISSDPTHGIGDWTLAQFLTALQNGVSPDGQQYYP HHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC AFPYTAYRLADRQDLADLFAFMQTLPASDTPSLPHDVGFPFNIRRTVGLWNQMFLHDDFA CCCCHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCEE VTFPLSDDAPQGRYLAEALGHCAECHTPRNALGALDRSRWMHGAPNPSGRGTIPALTPDQ EEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH LGWARQEIAAYLNDGFTPEFDTAGGHMRSVIQNLSHLTEADRLAIASYLLALPPMSGRP HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7543472 [H]