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The map label for this gene is mcp2 [H]

Identifier: 89054718

GI number: 89054718

Start: 2232932

End: 2234377

Strand: Reverse

Name: mcp2 [H]

Synonym: Jann_2227

Alternate gene names: 89054718

Gene position: 2234377-2232932 (Counterclockwise)

Preceding gene: 89054719

Following gene: 89054715

Centisome position: 51.75

GC content: 60.24

Gene sequence:

>1446_bases
ATGGCTGTTCCTGCCCCCAGCGATCCCTCTGCGCAGTCCGCTGAAAAACCCTTCGTCGAACGGCGTCGTGCGTCACGGGA
GGGGTTGAAGAAACTCAACTCGCTGGCTGAACAGACGGGCCAAAGCATCGTCAATCTCTCCGGTAACCTGCAACAGATCG
ATGCCGACGCAAGCGCGCAATTGACGATTGTGGAAGGATTGGCAGACCAGGCGCAATCGCTCACGCAGACAACGCATGTC
ATGACGGATGGGTTGGGTGAGGTCACCCGTGCCAACGCCAATGCGATGGAAACGGTGGATGGCTCCGTTGAGACCCTGAA
ACGCTCGGCTGAATGCAGCAAGGACGTGGCCACTTGGGTGGGCGATCTGGACGGCGCGCTGGGAGCGGTTGAAAGCACCC
TGGCAGAGGTCAATCGTGCCAACCTCAAGATCTCCGAGATCGCCAAGCAGGTGAATATTCTGGCGGTCAATGCCCGGATC
GAGGCGGCCCGGGCGGGCGATGCCGGCCGCGGTTTCGCGGTGGTGGCAGAGGCGATCAATCTCCTCTCCAAGCAAACGTC
CGATGCCGCCAGCGATGTCCGCACGTCGACCCAGACGCTCCAGGTCTCAATCGGTGATCTGCGCAAGGATGCAAACGGCA
TGAGCGACAGCGCCAATGAGGTGCTGGAGGGCTCCGCCCATGTCGACAAGGCTCTGGTTCAGATCAATGAGGACGTCCGT
GCAGCGGTCCAGGGGGCGGAAGGTCTGACAGACACCGTGCAAAACGTGGCCGACGCGGTGGAGCACTTCGCGCCCGCATT
TGAGACGCTGACCCGCGCGTTGAAAGCAACCGCAGCCGGGGTGCGCAGCGCGAATACGCGCGCCGAGGAAATCGTTGATA
TCTCTGAGAACGCGGTTCAGGTGTCGGTCGAACTGGGTGCCGATAACGCTGATGCAGCGCTGATCGAACTGGTCCAGGAT
CGCGCAACCATGATTGGCGACCTGTTTGATAAGGCCATCGCAAGCGGTAAAATCAGCACACAGGCGCTCTTCGACAGCAC
CTATTCTCCGATCCCGAACACGGTCCCCCAGCAGGTCATGGCCCGCTTCACGCGGTTCACCGACAGCGTTTTGCCGGCGG
TTCAGGAACCGGTCTTGACCCTTGATCCGCGCATCGTTTTTTGCGCTGCGGTCGATAAAAACGGCTACCTGCCCACCCAC
AATAGGAAGTTCTCCGCGCCCCAAAGTTCAGATGAGGTCTGGAACGCCGCCCATTGCCGCAACAGGCGCATCTTCGATGA
TCGGGTCGGCCTCAAATCAGGACAAAACACCGCGCCATTCCTGATGCAGACCTATCGGCGCGACATGGGCGGGGGGCAGT
TTGTTTTGATGAAGGATATCTCCGCCCCCATCATGGTCCAGGGCCGCCATTGGGGCGGCTTCAGAATGGGTGTGGCACAA
AAATAG

Upstream 100 bases:

>100_bases
GTCTGGTCGCCCCTAGGCGCGCGGTGATCTTTCCGCGTGCTTAACCGCACGGTAAGACCCTGGGTGCTAGGACAGCCGCG
CAATCATCAAAGGCACCCCC

Downstream 100 bases:

>100_bases
GCTGCACGGCCCGGGTCAGAGCCAAAAACCGGTCCCGCGCAGAGGCACATGAGCCACAACGGCAAAGGGATGTCTAAGCG
AGCTTCGCCAGCCGATTGGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MAVPAPSDPSAQSAEKPFVERRRASREGLKKLNSLAEQTGQSIVNLSGNLQQIDADASAQLTIVEGLADQAQSLTQTTHV
MTDGLGEVTRANANAMETVDGSVETLKRSAECSKDVATWVGDLDGALGAVESTLAEVNRANLKISEIAKQVNILAVNARI
EAARAGDAGRGFAVVAEAINLLSKQTSDAASDVRTSTQTLQVSIGDLRKDANGMSDSANEVLEGSAHVDKALVQINEDVR
AAVQGAEGLTDTVQNVADAVEHFAPAFETLTRALKATAAGVRSANTRAEEIVDISENAVQVSVELGADNADAALIELVQD
RATMIGDLFDKAIASGKISTQALFDSTYSPIPNTVPQQVMARFTRFTDSVLPAVQEPVLTLDPRIVFCAAVDKNGYLPTH
NRKFSAPQSSDEVWNAAHCRNRRIFDDRVGLKSGQNTAPFLMQTYRRDMGGGQFVLMKDISAPIMVQGRHWGGFRMGVAQ
K

Sequences:

>Translated_481_residues
MAVPAPSDPSAQSAEKPFVERRRASREGLKKLNSLAEQTGQSIVNLSGNLQQIDADASAQLTIVEGLADQAQSLTQTTHV
MTDGLGEVTRANANAMETVDGSVETLKRSAECSKDVATWVGDLDGALGAVESTLAEVNRANLKISEIAKQVNILAVNARI
EAARAGDAGRGFAVVAEAINLLSKQTSDAASDVRTSTQTLQVSIGDLRKDANGMSDSANEVLEGSAHVDKALVQINEDVR
AAVQGAEGLTDTVQNVADAVEHFAPAFETLTRALKATAAGVRSANTRAEEIVDISENAVQVSVELGADNADAALIELVQD
RATMIGDLFDKAIASGKISTQALFDSTYSPIPNTVPQQVMARFTRFTDSVLPAVQEPVLTLDPRIVFCAAVDKNGYLPTH
NRKFSAPQSSDEVWNAAHCRNRRIFDDRVGLKSGQNTAPFLMQTYRRDMGGGQFVLMKDISAPIMVQGRHWGGFRMGVAQ
K
>Mature_480_residues
AVPAPSDPSAQSAEKPFVERRRASREGLKKLNSLAEQTGQSIVNLSGNLQQIDADASAQLTIVEGLADQAQSLTQTTHVM
TDGLGEVTRANANAMETVDGSVETLKRSAECSKDVATWVGDLDGALGAVESTLAEVNRANLKISEIAKQVNILAVNARIE
AARAGDAGRGFAVVAEAINLLSKQTSDAASDVRTSTQTLQVSIGDLRKDANGMSDSANEVLEGSAHVDKALVQINEDVRA
AVQGAEGLTDTVQNVADAVEHFAPAFETLTRALKATAAGVRSANTRAEEIVDISENAVQVSVELGADNADAALIELVQDR
ATMIGDLFDKAIASGKISTQALFDSTYSPIPNTVPQQVMARFTRFTDSVLPAVQEPVLTLDPRIVFCAAVDKNGYLPTHN
RKFSAPQSSDEVWNAAHCRNRRIFDDRVGLKSGQNTAPFLMQTYRRDMGGGQFVLMKDISAPIMVQGRHWGGFRMGVAQK

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR000727 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 51260; Mature: 51129

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPAPSDPSAQSAEKPFVERRRASREGLKKLNSLAEQTGQSIVNLSGNLQQIDADASAQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCHHEECCCCCCE
LTIVEGLADQAQSLTQTTHVMTDGLGEVTRANANAMETVDGSVETLKRSAECSKDVATWV
EEHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
GDLDGALGAVESTLAEVNRANLKISEIAKQVNILAVNARIEAARAGDAGRGFAVVAEAIN
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEECEEEHHCCCCCCCHHHHHHHHHH
LLSKQTSDAASDVRTSTQTLQVSIGDLRKDANGMSDSANEVLEGSAHVDKALVQINEDVR
HHHHCCHHHHHHHHHCHHEEEEEHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHH
AAVQGAEGLTDTVQNVADAVEHFAPAFETLTRALKATAAGVRSANTRAEEIVDISENAVQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEE
VSVELGADNADAALIELVQDRATMIGDLFDKAIASGKISTQALFDSTYSPIPNTVPQQVM
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHH
ARFTRFTDSVLPAVQEPVLTLDPRIVFCAAVDKNGYLPTHNRKFSAPQSSDEVWNAAHCR
HHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHC
NRRIFDDRVGLKSGQNTAPFLMQTYRRDMGGGQFVLMKDISAPIMVQGRHWGGFRMGVAQ
CCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCEECCCCC
K
C
>Mature Secondary Structure 
AVPAPSDPSAQSAEKPFVERRRASREGLKKLNSLAEQTGQSIVNLSGNLQQIDADASAQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCHHEECCCCCCE
LTIVEGLADQAQSLTQTTHVMTDGLGEVTRANANAMETVDGSVETLKRSAECSKDVATWV
EEHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
GDLDGALGAVESTLAEVNRANLKISEIAKQVNILAVNARIEAARAGDAGRGFAVVAEAIN
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEECEEEHHCCCCCCCHHHHHHHHHH
LLSKQTSDAASDVRTSTQTLQVSIGDLRKDANGMSDSANEVLEGSAHVDKALVQINEDVR
HHHHCCHHHHHHHHHCHHEEEEEHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHH
AAVQGAEGLTDTVQNVADAVEHFAPAFETLTRALKATAAGVRSANTRAEEIVDISENAVQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEE
VSVELGADNADAALIELVQDRATMIGDLFDKAIASGKISTQALFDSTYSPIPNTVPQQVM
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHH
ARFTRFTDSVLPAVQEPVLTLDPRIVFCAAVDKNGYLPTHNRKFSAPQSSDEVWNAAHCR
HHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHC
NRRIFDDRVGLKSGQNTAPFLMQTYRRDMGGGQFVLMKDISAPIMVQGRHWGGFRMGVAQ
CCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCEECCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]