Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054715
Identifier: 89054715
GI number: 89054715
Start: 2230120
End: 2230398
Strand: Reverse
Name: 89054715
Synonym: Jann_2224
Alternate gene names: NA
Gene position: 2230398-2230120 (Counterclockwise)
Preceding gene: 89054718
Following gene: 89054713
Centisome position: 51.65
GC content: 62.01
Gene sequence:
>279_bases GTGACGGGGAGTTTTGATCCCATTGGAGCGCTAGTTATGACCGATCTGACAACCCACCTGTCCACCATTCACCGCCCTGG TCTGTTGGTGAAAGCAGCCACTCTGGCCTGTGAAACAGGGGATGCACACCGCCGTGCCAAGCGTCGGCCCGTCGGAAAAC TGCTGGCAGAAGAAGAGATGCTGAACGCCGCGCGGATGGGTGGCGGCATCGGGTATTCGCCCACCCGTCACGTTCAGGTC ATGAGCGCCCTGCTCGCCGCCGCCCGGGGTGTCAACTAG
Upstream 100 bases:
>100_bases CTGTGGATAAGTGGAAAATTGTTTCTTTTCTGTAAACAATCCAGAAGGGTCCGAACGCAAACATCGCAGGTCACGCAACA GGGGCGTCAGCCGGGTCACA
Downstream 100 bases:
>100_bases ACAATTTTACGAAAACCGGTGCCGTTAAGGAATTGGGCAGCAATGTGGATAAGTCGGCCCTAGAACCCGGTCAAAAGGCC GACTCACCCACGCTCAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MTGSFDPIGALVMTDLTTHLSTIHRPGLLVKAATLACETGDAHRRAKRRPVGKLLAEEEMLNAARMGGGIGYSPTRHVQV MSALLAAARGVN
Sequences:
>Translated_92_residues MTGSFDPIGALVMTDLTTHLSTIHRPGLLVKAATLACETGDAHRRAKRRPVGKLLAEEEMLNAARMGGGIGYSPTRHVQV MSALLAAARGVN >Mature_91_residues TGSFDPIGALVMTDLTTHLSTIHRPGLLVKAATLACETGDAHRRAKRRPVGKLLAEEEMLNAARMGGGIGYSPTRHVQVM SALLAAARGVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9707; Mature: 9576
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSFDPIGALVMTDLTTHLSTIHRPGLLVKAATLACETGDAHRRAKRRPVGKLLAEEEM CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHH LNAARMGGGIGYSPTRHVQVMSALLAAARGVN HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TGSFDPIGALVMTDLTTHLSTIHRPGLLVKAATLACETGDAHRRAKRRPVGKLLAEEEM CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHH LNAARMGGGIGYSPTRHVQVMSALLAAARGVN HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA