Click here to switch to the map view.

The map label for this gene is yjbJ [C]

Identifier: 89054693

GI number: 89054693

Start: 2212198

End: 2212395

Strand: Reverse

Name: yjbJ [C]

Synonym: Jann_2202

Alternate gene names: 89054693

Gene position: 2212395-2212198 (Counterclockwise)

Preceding gene: 89054696

Following gene: 89054692

Centisome position: 51.24

GC content: 50.51

Gene sequence:

>198_bases
ATGAACTGGGACCAAGTTGAAGGCAAATGGAACGAGATGACGGGCAACGTCAAAGCCAAGTGGGGCGAGTTAACAGACGA
TGAGATCGCAGAAGTCAATGGCAACCGGGAAGCGCTTGAGGGCAAGATCCAAGCCAAATACGGCAAAACCAAAGAGGCCG
CAAAACAGGAAGTCGATGACTTCCTGAACGAGCATTAA

Upstream 100 bases:

>100_bases
GATCGAAATCGGCAACACGCTCCACGTCCTAACGACGTGGCCAGCATGCAATTTTCCCTCACCCGAGCAGCCGCCGGGTT
ATTTTCAGAAAGGACGCGCT

Downstream 100 bases:

>100_bases
TCACTGAACTCTGACAGAAGCGTCATGCGCCAGCGCCCTTAAGTGCGCTGGCGCATCCGCAATTTTGCCCCGTATTTCAT
GAGGAGACGCAAGATGAATA

Product: CsbD-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MNWDQVEGKWNEMTGNVKAKWGELTDDEIAEVNGNREALEGKIQAKYGKTKEAAKQEVDDFLNEH

Sequences:

>Translated_65_residues
MNWDQVEGKWNEMTGNVKAKWGELTDDEIAEVNGNREALEGKIQAKYGKTKEAAKQEVDDFLNEH
>Mature_65_residues
MNWDQVEGKWNEMTGNVKAKWGELTDDEIAEVNGNREALEGKIQAKYGKTKEAAKQEVDDFLNEH

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

None

Paralogues:

None

Copy number: 12620 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 440 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 7438; Mature: 7438

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWDQVEGKWNEMTGNVKAKWGELTDDEIAEVNGNREALEGKIQAKYGKTKEAAKQEVDD
CCCCCCCCCCCCCCCCCEECCCCCCCCHHHHCCCCHHHHCCHHHCCCCCCHHHHHHHHHH
FLNEH
HHCCC
>Mature Secondary Structure
MNWDQVEGKWNEMTGNVKAKWGELTDDEIAEVNGNREALEGKIQAKYGKTKEAAKQEVDD
CCCCCCCCCCCCCCCCCEECCCCCCCCHHHHCCCCHHHHCCHHHCCCCCCHHHHHHHHHH
FLNEH
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]