Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054671
Identifier: 89054671
GI number: 89054671
Start: 2187294
End: 2187530
Strand: Reverse
Name: 89054671
Synonym: Jann_2180
Alternate gene names: NA
Gene position: 2187530-2187294 (Counterclockwise)
Preceding gene: 89054672
Following gene: 89054670
Centisome position: 50.66
GC content: 68.35
Gene sequence:
>237_bases ATGAGCGATGACGTCTGGCACCGTGACGAAATCCAGTCACCCTGCGTGAAGATCTGCCTGATCCACCCCGAGGCGCGGCT TTGCACCGGCTGTCTGCGTACGATTGACGAGATCACCCAATGGAGCCGCCTCACCCATGCCGCCCGTGCCGAGGTGATGG AGGCCCTGCCCGCTCGCCGCTCGCAACTGACCCAACGCCGGGGGGGCCGCGCCGCCCGCCTGTCGCGCGACCGGTGA
Upstream 100 bases:
>100_bases ATACGAGCCGAAAGCGTCGCTCTGAAGTGATCGACGCCGTGGCCGCGAGCTATATCTTGCAAGGTGCGCTGGACCGGTTG CGCCATTTGAGGGCTGTGTG
Downstream 100 bases:
>100_bases CGGCGGAACCAACACGATATCCGCACGTTACCCCTCTGATCAAGGAGGGACCGACATGGCCAGCTATTCCAAAGGCGACA AGGTGAAGTGGGACTGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSDDVWHRDEIQSPCVKICLIHPEARLCTGCLRTIDEITQWSRLTHAARAEVMEALPARRSQLTQRRGGRAARLSRDR
Sequences:
>Translated_78_residues MSDDVWHRDEIQSPCVKICLIHPEARLCTGCLRTIDEITQWSRLTHAARAEVMEALPARRSQLTQRRGGRAARLSRDR >Mature_77_residues SDDVWHRDEIQSPCVKICLIHPEARLCTGCLRTIDEITQWSRLTHAARAEVMEALPARRSQLTQRRGGRAARLSRDR
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8996; Mature: 8865
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDVWHRDEIQSPCVKICLIHPEARLCTGCLRTIDEITQWSRLTHAARAEVMEALPARR CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQLTQRRGGRAARLSRDR HHHHHHCCCCCCCCCCCC >Mature Secondary Structure SDDVWHRDEIQSPCVKICLIHPEARLCTGCLRTIDEITQWSRLTHAARAEVMEALPARR CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQLTQRRGGRAARLSRDR HHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA