Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054670
Identifier: 89054670
GI number: 89054670
Start: 2187023
End: 2187238
Strand: Reverse
Name: 89054670
Synonym: Jann_2179
Alternate gene names: NA
Gene position: 2187238-2187023 (Counterclockwise)
Preceding gene: 89054671
Following gene: 89054666
Centisome position: 50.65
GC content: 60.19
Gene sequence:
>216_bases ATGGCCAGCTATTCCAAAGGCGACAAGGTGAAGTGGGACTGGGGCAACGGCACCGGGACCGGCACGGTGGAGAAAACCTA CACCGACAGCATCACCCGCAAACTGCAAGGCAGCGAGGTCACGCGCAACGGATCGGACGACGACCCCGCCCTTTACATCG AACAGGACGATGGCGACGGCGTGCTGAAACTGTCCTCCGAAGTGTCCAAGGCTTAA
Upstream 100 bases:
>100_bases CAACGCCGGGGGGGCCGCGCCGCCCGCCTGTCGCGCGACCGGTGACGGCGGAACCAACACGATATCCGCACGTTACCCCT CTGATCAAGGAGGGACCGAC
Downstream 100 bases:
>100_bases GGCGCGCTCAGCCACCGGGCCGGGTCGTCAAAGCAGGGCCGGAAATAGGCGATCGCGCGGCCCTCAGGCGCAGACCGGGC CCCGTTTTGCCAGGGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MASYSKGDKVKWDWGNGTGTGTVEKTYTDSITRKLQGSEVTRNGSDDDPALYIEQDDGDGVLKLSSEVSKA
Sequences:
>Translated_71_residues MASYSKGDKVKWDWGNGTGTGTVEKTYTDSITRKLQGSEVTRNGSDDDPALYIEQDDGDGVLKLSSEVSKA >Mature_70_residues ASYSKGDKVKWDWGNGTGTGTVEKTYTDSITRKLQGSEVTRNGSDDDPALYIEQDDGDGVLKLSSEVSKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7660; Mature: 7529
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASYSKGDKVKWDWGNGTGTGTVEKTYTDSITRKLQGSEVTRNGSDDDPALYIEQDDGDG CCCCCCCCEEEEECCCCCCCCCEECCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCC VLKLSSEVSKA EEEECCCCCCC >Mature Secondary Structure ASYSKGDKVKWDWGNGTGTGTVEKTYTDSITRKLQGSEVTRNGSDDDPALYIEQDDGDG CCCCCCCEEEEECCCCCCCCCEECCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCC VLKLSSEVSKA EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA