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The map label for this gene is 89054589

Identifier: 89054589

GI number: 89054589

Start: 2107519

End: 2108697

Strand: Reverse

Name: 89054589

Synonym: Jann_2098

Alternate gene names: NA

Gene position: 2108697-2107519 (Counterclockwise)

Preceding gene: 89054590

Following gene: 89054588

Centisome position: 48.84

GC content: 60.47

Gene sequence:

>1179_bases
ATGAAGGCGCACCGCCCACCGCATCATTTGCAAAGCGCTGCTATTTTGGTCATCCTCAGGGATATGGAGTTCCTAAGCGT
CAACCACAGCGGCGTCCTGATCCTAATGTCCTGCATCGTGGCGCTGGTCGCAGGGTTCACAGGTCTGTCGCTGACCCGCG
ATCTGTCTGAAAAGCCGATGTTCCAGAAGAAAGCCTCCATAGCGCTGGCGGCGGTGGCCCTCGGCGGTGGCATCTGGGCC
ATGCATTTCGTTGCCATGCTGGGGCTGAAGCTGCCAATCCTGTTCTACTATGACGCGGCGATCACGCTGGTATCGGCCCT
ATCCGCGATCCTGCTGGTTGGCGCGGCCCTGATCCTGTTGCATTTTGCGGAGCGGACGCCGCTCATCATTTCGCTGGCGG
GAGCTATCGTGGGCGTCGGCATTCTGGTCATGCATTATATTGGCATGGCGGGGCTGGAGCTGTGCAGGGCCGTCTACTCG
ACCGGCGGCGTTGTGTTTTCGTCCATCGTGGCCATCGGCCTGTGCGTCCTTGCGTTCTGGATCGCCTATGGACAGCGGAC
CAACCGCAACATCGTTCTGGGGACGATCTGTTTTGCGATAGCGGTCTGCTCCGTCCATTTTCTGGCGATTGCGGGGACCA
ATTTCGTGCCAGAGCCTACCCTGGCTGAATTCGGCCCGTCCATGAGCAATGAGACCCTCGCGCTGGGGGTGATCTTCTTC
AGCTTCGTCATTTTCGGGGCTTGCCTCTGGGTGAGCGTCACCTATCTGGTCGCCCCCGCTGCCAAGGCCGAAAGCGAGGA
TCCCCTGCCCGTGCCTGAGCCGATCTCGGACCTGCAAATCCCGTGTGAAAGCGATGGCAGCAAGGTGTTTGTCCGGTCCC
GCGACGTGTTGTTTGTGCGCGCCGATGGGCACTACACCCAGATCTATACCGAGGATGACCGGCTGTTTTGCGTTTGGCCG
ATCACAGTGGCATCCAAACGGCTGTTGCCCGCAGGCTTCCTCCAGACCCATCGCAGCTATCTGGTCAATCCCGACCGTGT
CACCCGGTTCGAGCGGACCAAAGACAAAGGCCGCTGTCTGTTTGACGGCGACGATCTGCCGCCCGCCCCGGTGAGCCGGT
CCAAACTGAAGGCGATCCAGGACGCACTTGCACCGCAAGTCGGCGCACTTGGTGCGTGA

Upstream 100 bases:

>100_bases
CTCGGCCGCACACGCTCACAGCAGGTTTTCGGGACACGTTTGGACACAACCTCCGGTCAGCGATGAGCCTTTGTACGGCA
TCATCACATCTCACGGCAAA

Downstream 100 bases:

>100_bases
GGGCGCGCATTTCGTGCAAGGACCCCGTGTTTCATGAGTTTTCCCGTGCCCTGACATGCCAGGGCATGCAGTCTCTCTCT
TAGCCAGAACATTCGCTTTA

Product: putative integral membrane sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKAHRPPHHLQSAAILVILRDMEFLSVNHSGVLILMSCIVALVAGFTGLSLTRDLSEKPMFQKKASIALAAVALGGGIWA
MHFVAMLGLKLPILFYYDAAITLVSALSAILLVGAALILLHFAERTPLIISLAGAIVGVGILVMHYIGMAGLELCRAVYS
TGGVVFSSIVAIGLCVLAFWIAYGQRTNRNIVLGTICFAIAVCSVHFLAIAGTNFVPEPTLAEFGPSMSNETLALGVIFF
SFVIFGACLWVSVTYLVAPAAKAESEDPLPVPEPISDLQIPCESDGSKVFVRSRDVLFVRADGHYTQIYTEDDRLFCVWP
ITVASKRLLPAGFLQTHRSYLVNPDRVTRFERTKDKGRCLFDGDDLPPAPVSRSKLKAIQDALAPQVGALGA

Sequences:

>Translated_392_residues
MKAHRPPHHLQSAAILVILRDMEFLSVNHSGVLILMSCIVALVAGFTGLSLTRDLSEKPMFQKKASIALAAVALGGGIWA
MHFVAMLGLKLPILFYYDAAITLVSALSAILLVGAALILLHFAERTPLIISLAGAIVGVGILVMHYIGMAGLELCRAVYS
TGGVVFSSIVAIGLCVLAFWIAYGQRTNRNIVLGTICFAIAVCSVHFLAIAGTNFVPEPTLAEFGPSMSNETLALGVIFF
SFVIFGACLWVSVTYLVAPAAKAESEDPLPVPEPISDLQIPCESDGSKVFVRSRDVLFVRADGHYTQIYTEDDRLFCVWP
ITVASKRLLPAGFLQTHRSYLVNPDRVTRFERTKDKGRCLFDGDDLPPAPVSRSKLKAIQDALAPQVGALGA
>Mature_392_residues
MKAHRPPHHLQSAAILVILRDMEFLSVNHSGVLILMSCIVALVAGFTGLSLTRDLSEKPMFQKKASIALAAVALGGGIWA
MHFVAMLGLKLPILFYYDAAITLVSALSAILLVGAALILLHFAERTPLIISLAGAIVGVGILVMHYIGMAGLELCRAVYS
TGGVVFSSIVAIGLCVLAFWIAYGQRTNRNIVLGTICFAIAVCSVHFLAIAGTNFVPEPTLAEFGPSMSNETLALGVIFF
SFVIFGACLWVSVTYLVAPAAKAESEDPLPVPEPISDLQIPCESDGSKVFVRSRDVLFVRADGHYTQIYTEDDRLFCVWP
ITVASKRLLPAGFLQTHRSYLVNPDRVTRFERTKDKGRCLFDGDDLPPAPVSRSKLKAIQDALAPQVGALGA

Specific function: Unknown

COG id: COG3300

COG function: function code T; MHYT domain (predicted integral membrane sensor domain)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 42170; Mature: 42170

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: PS50924 MHYT ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAHRPPHHLQSAAILVILRDMEFLSVNHSGVLILMSCIVALVAGFTGLSLTRDLSEKPM
CCCCCCCHHHHHHHHHHEEECCHHEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCH
FQKKASIALAAVALGGGIWAMHFVAMLGLKLPILFYYDAAITLVSALSAILLVGAALILL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFAERTPLIISLAGAIVGVGILVMHYIGMAGLELCRAVYSTGGVVFSSIVAIGLCVLAFW
HHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
IAYGQRTNRNIVLGTICFAIAVCSVHFLAIAGTNFVPEPTLAEFGPSMSNETLALGVIFF
HHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHH
SFVIFGACLWVSVTYLVAPAAKAESEDPLPVPEPISDLQIPCESDGSKVFVRSRDVLFVR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEE
ADGHYTQIYTEDDRLFCVWPITVASKRLLPAGFLQTHRSYLVNPDRVTRFERTKDKGRCL
ECCCEEEEEECCCCEEEEEEHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEE
FDGDDLPPAPVSRSKLKAIQDALAPQVGALGA
ECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKAHRPPHHLQSAAILVILRDMEFLSVNHSGVLILMSCIVALVAGFTGLSLTRDLSEKPM
CCCCCCCHHHHHHHHHHEEECCHHEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCH
FQKKASIALAAVALGGGIWAMHFVAMLGLKLPILFYYDAAITLVSALSAILLVGAALILL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFAERTPLIISLAGAIVGVGILVMHYIGMAGLELCRAVYSTGGVVFSSIVAIGLCVLAFW
HHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
IAYGQRTNRNIVLGTICFAIAVCSVHFLAIAGTNFVPEPTLAEFGPSMSNETLALGVIFF
HHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHH
SFVIFGACLWVSVTYLVAPAAKAESEDPLPVPEPISDLQIPCESDGSKVFVRSRDVLFVR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEE
ADGHYTQIYTEDDRLFCVWPITVASKRLLPAGFLQTHRSYLVNPDRVTRFERTKDKGRCL
ECCCEEEEEECCCCEEEEEEHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEE
FDGDDLPPAPVSRSKLKAIQDALAPQVGALGA
ECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]