Click here to switch to the map view.

The map label for this gene is 89054497

Identifier: 89054497

GI number: 89054497

Start: 2012478

End: 2013473

Strand: Direct

Name: 89054497

Synonym: Jann_2006

Alternate gene names: NA

Gene position: 2012478-2013473 (Clockwise)

Preceding gene: 89054495

Following gene: 89054499

Centisome position: 46.61

GC content: 55.32

Gene sequence:

>996_bases
ATGGCGAAGAGTAAGATTGACGAGTTGATGTCGGTTGGCATCGATATTGGCAAAGACACATTCCATGTCGTGGCATTTGA
CCCTGATGGGCACCTGGTGATGCGCAAGCGGATCAAGCGGTTGGCTCTTGTGGCGACCTTCGAGAAGTTGCCGCGTTGTG
TGGTGGGTATGGAGGCGTGCCTGAGCGCCCATTTCGTGAGCCGGACGCTTCGCAAGATGGGCTTCGAGCCTGGGATCATT
CCAGCGATCTACGTGAAGCCGTTCATCAAGGGTCAGAAGAACGATTACAATTACGCCGAGGCTATATCTGAGGCAGCGTT
ACGCCCTAATCTGCCAGTCGTTCCAGAGAAAAGCCAAGAGCAGCTCGACCTGCAGGCGCTACATCGCGTTCGCTCGCGCC
TTGTGTCGCGCCGAACTGCGTCGATAAATCAGATCCGCGCTTTCTTGATCGAGCAAGGCATCACGGTGCGCAAAGGTCTG
CGCGTCTTGAAGAATTCCTTCGGAAAGATCTTGGATGAGCGCAAGGACGAGATATCACCGCGCATGCGCACGATCTTGAT
CGGCCTGTATGGAGATTGGCTTTGGTTAGATGATCGGATTGATACGGTTTCCAAAGAGATCGAGCAGATCAGTCGAACAG
AGGAGAACTGCATCAATGTCATGACGGTGCCTGGCATTGGCCCAATGATCTCAACCGCGATGGTCGCCGCCATCGGGACA
GGCGAAGCTTTCGGGCGAGGACGCGACTTTGCGGCCTGGGTGGGATTGGTGCCCAGGCAATACAGCACCGGAGGACGAAC
GATCCTCGGACGCATCACCAAACGTGGCAGTCGATATTTGCGAATGCTCTTTGTCCAAGCTGCCAAGGTTATCTTGATGC
GGACCAATCGATGGCCGGACTTCAGCTTTGGCGATTGGTTGATCAAGGCCGCAGAGCGGATGAACCGAAACAAGCTCGCC
GTTGCCTTGGCCAACAAATTGGCGCGCATGGCCTAG

Upstream 100 bases:

>100_bases
AGCATCAATGCCGACGGCAAAGGCCGGTAATGGGATGTACCGGCTGCTTCACCCAGCAGGTTAGGCTTGGCCTATTTCAC
CTGCAGATGGGAGAAGTAGC

Downstream 100 bases:

>100_bases
AGTATTTTGAGACACAGAACGGCGTTTGATGCGCCAAGGGATGAGGTCGCCATCGGCGTCTAAGCCGGATCGACCCAAAG
GAGTTCGCGATAGATAGAAA

Product: transposase IS116/IS110/IS902

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MAKSKIDELMSVGIDIGKDTFHVVAFDPDGHLVMRKRIKRLALVATFEKLPRCVVGMEACLSAHFVSRTLRKMGFEPGII
PAIYVKPFIKGQKNDYNYAEAISEAALRPNLPVVPEKSQEQLDLQALHRVRSRLVSRRTASINQIRAFLIEQGITVRKGL
RVLKNSFGKILDERKDEISPRMRTILIGLYGDWLWLDDRIDTVSKEIEQISRTEENCINVMTVPGIGPMISTAMVAAIGT
GEAFGRGRDFAAWVGLVPRQYSTGGRTILGRITKRGSRYLRMLFVQAAKVILMRTNRWPDFSFGDWLIKAAERMNRNKLA
VALANKLARMA

Sequences:

>Translated_331_residues
MAKSKIDELMSVGIDIGKDTFHVVAFDPDGHLVMRKRIKRLALVATFEKLPRCVVGMEACLSAHFVSRTLRKMGFEPGII
PAIYVKPFIKGQKNDYNYAEAISEAALRPNLPVVPEKSQEQLDLQALHRVRSRLVSRRTASINQIRAFLIEQGITVRKGL
RVLKNSFGKILDERKDEISPRMRTILIGLYGDWLWLDDRIDTVSKEIEQISRTEENCINVMTVPGIGPMISTAMVAAIGT
GEAFGRGRDFAAWVGLVPRQYSTGGRTILGRITKRGSRYLRMLFVQAAKVILMRTNRWPDFSFGDWLIKAAERMNRNKLA
VALANKLARMA
>Mature_330_residues
AKSKIDELMSVGIDIGKDTFHVVAFDPDGHLVMRKRIKRLALVATFEKLPRCVVGMEACLSAHFVSRTLRKMGFEPGIIP
AIYVKPFIKGQKNDYNYAEAISEAALRPNLPVVPEKSQEQLDLQALHRVRSRLVSRRTASINQIRAFLIEQGITVRKGLR
VLKNSFGKILDERKDEISPRMRTILIGLYGDWLWLDDRIDTVSKEIEQISRTEENCINVMTVPGIGPMISTAMVAAIGTG
EAFGRGRDFAAWVGLVPRQYSTGGRTILGRITKRGSRYLRMLFVQAAKVILMRTNRWPDFSFGDWLIKAAERMNRNKLAV
ALANKLARMA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 37328; Mature: 37197

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSKIDELMSVGIDIGKDTFHVVAFDPDGHLVMRKRIKRLALVATFEKLPRCVVGMEAC
CCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAHFVSRTLRKMGFEPGIIPAIYVKPFIKGQKNDYNYAEAISEAALRPNLPVVPEKSQE
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHH
QLDLQALHRVRSRLVSRRTASINQIRAFLIEQGITVRKGLRVLKNSFGKILDERKDEISP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCH
RMRTILIGLYGDWLWLDDRIDTVSKEIEQISRTEENCINVMTVPGIGPMISTAMVAAIGT
HHHHHHHEECCCEEEECHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCC
GEAFGRGRDFAAWVGLVPRQYSTGGRTILGRITKRGSRYLRMLFVQAAKVILMRTNRWPD
CHHHCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FSFGDWLIKAAERMNRNKLAVALANKLARMA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKSKIDELMSVGIDIGKDTFHVVAFDPDGHLVMRKRIKRLALVATFEKLPRCVVGMEAC
CHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAHFVSRTLRKMGFEPGIIPAIYVKPFIKGQKNDYNYAEAISEAALRPNLPVVPEKSQE
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHH
QLDLQALHRVRSRLVSRRTASINQIRAFLIEQGITVRKGLRVLKNSFGKILDERKDEISP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCH
RMRTILIGLYGDWLWLDDRIDTVSKEIEQISRTEENCINVMTVPGIGPMISTAMVAAIGT
HHHHHHHEECCCEEEECHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCC
GEAFGRGRDFAAWVGLVPRQYSTGGRTILGRITKRGSRYLRMLFVQAAKVILMRTNRWPD
CHHHCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FSFGDWLIKAAERMNRNKLAVALANKLARMA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7607411 [H]