Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054412
Identifier: 89054412
GI number: 89054412
Start: 1909285
End: 1909971
Strand: Reverse
Name: 89054412
Synonym: Jann_1921
Alternate gene names: NA
Gene position: 1909971-1909285 (Counterclockwise)
Preceding gene: 89054413
Following gene: 89054411
Centisome position: 44.23
GC content: 58.66
Gene sequence:
>687_bases ATGCGGATAATCCTCCTTATTCTGTTAACCATCTGCCTGGCGGCCTGCGGGCGTCCGTTAACCGAGGCGGAGGCCGCCTA TATGGCCGAGATCCAAGGCGACACCTTCGACGCCTCGCGGGTGCGGATCACGGAGAACCCCTTTGTTGGCCTGATCACCC AAACCTATGCGACACGACCCCCAACCACTTGCCGAGAAAGAATTTTCCCACCCCCTGAAGCACCGACAATCTCGTCTCAG ACCGGCGGCATTGTCTTCTTCAACACGCTGCATCTGCGCGAAGATTTGGTAATCGATGATTACACCCAATTTCCCGACGG AACCCGGGGCCTTGTCGCGGTCATGTTCTTTGCCCACGAGATGACGCATATCTGGCAATGGCAGAACCGGGAGCTGACCG GCTACCACCCGTTCCGCGCCTTCGCGGAACATGCGAGGATCGATGACCCTTACCTCTTTTCCAACGACGATCCGCGGCCA TTTCTGGATTATGGGTATGAGCAGCAGGCCTCTCTCGTAGAAGAATACGTGTGCTGTCGCGCCCTTGATCCGGGCGGTCA GCGCACCGGACGATTGGAGGCGCTGATCGGTCAGGTCATGCCGGTCACGCCACTGCGCGAACGGGTCGACGACACGCCGA TCTATCTGCCGTGGGAAGGTGCGCCGATCCGTGGTATTTGTTCCTAA
Upstream 100 bases:
>100_bases ACAGTCAAGACGGTCGCCCTGGCCACGGCCACGATGGCGCTTCCGTGATGCTGTGGCCTGAGGCTTGTACCTGCGGAAAA ATAGCGGCACGGTCCGGGTT
Downstream 100 bases:
>100_bases TCAAAGGGTTAAATCATGCCAACCCAAGCCTTGATCATGGTCCTTGCAGGGATTGGCATCCCGATTCTCGCCGCCCTTAA TGCGCGCCTGGGGGCCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MRIILLILLTICLAACGRPLTEAEAAYMAEIQGDTFDASRVRITENPFVGLITQTYATRPPTTCRERIFPPPEAPTISSQ TGGIVFFNTLHLREDLVIDDYTQFPDGTRGLVAVMFFAHEMTHIWQWQNRELTGYHPFRAFAEHARIDDPYLFSNDDPRP FLDYGYEQQASLVEEYVCCRALDPGGQRTGRLEALIGQVMPVTPLRERVDDTPIYLPWEGAPIRGICS
Sequences:
>Translated_228_residues MRIILLILLTICLAACGRPLTEAEAAYMAEIQGDTFDASRVRITENPFVGLITQTYATRPPTTCRERIFPPPEAPTISSQ TGGIVFFNTLHLREDLVIDDYTQFPDGTRGLVAVMFFAHEMTHIWQWQNRELTGYHPFRAFAEHARIDDPYLFSNDDPRP FLDYGYEQQASLVEEYVCCRALDPGGQRTGRLEALIGQVMPVTPLRERVDDTPIYLPWEGAPIRGICS >Mature_228_residues MRIILLILLTICLAACGRPLTEAEAAYMAEIQGDTFDASRVRITENPFVGLITQTYATRPPTTCRERIFPPPEAPTISSQ TGGIVFFNTLHLREDLVIDDYTQFPDGTRGLVAVMFFAHEMTHIWQWQNRELTGYHPFRAFAEHARIDDPYLFSNDDPRP FLDYGYEQQASLVEEYVCCRALDPGGQRTGRLEALIGQVMPVTPLRERVDDTPIYLPWEGAPIRGICS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25856; Mature: 25856
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIILLILLTICLAACGRPLTEAEAAYMAEIQGDTFDASRVRITENPFVGLITQTYATRP CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEHHHCCCC PTTCRERIFPPPEAPTISSQTGGIVFFNTLHLREDLVIDDYTQFPDGTRGLVAVMFFAHE CCHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEECCHHCCCCCCHHHHHHHHHHHH MTHIWQWQNRELTGYHPFRAFAEHARIDDPYLFSNDDPRPFLDYGYEQQASLVEEYVCCR HHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCHHHHCCCHHHHHHHHHHHHHH ALDPGGQRTGRLEALIGQVMPVTPLRERVDDTPIYLPWEGAPIRGICS CCCCCCCCCHHHHHHHHCCCCCCHHHHHCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MRIILLILLTICLAACGRPLTEAEAAYMAEIQGDTFDASRVRITENPFVGLITQTYATRP CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEHHHCCCC PTTCRERIFPPPEAPTISSQTGGIVFFNTLHLREDLVIDDYTQFPDGTRGLVAVMFFAHE CCHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEECCHHCCCCCCHHHHHHHHHHHH MTHIWQWQNRELTGYHPFRAFAEHARIDDPYLFSNDDPRPFLDYGYEQQASLVEEYVCCR HHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCHHHHCCCHHHHHHHHHHHHHH ALDPGGQRTGRLEALIGQVMPVTPLRERVDDTPIYLPWEGAPIRGICS CCCCCCCCCHHHHHHHHCCCCCCHHHHHCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA