Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054411
Identifier: 89054411
GI number: 89054411
Start: 1908826
End: 1909269
Strand: Reverse
Name: 89054411
Synonym: Jann_1920
Alternate gene names: NA
Gene position: 1909269-1908826 (Counterclockwise)
Preceding gene: 89054412
Following gene: 89054404
Centisome position: 44.22
GC content: 60.36
Gene sequence:
>444_bases ATGCCAACCCAAGCCTTGATCATGGTCCTTGCAGGGATTGGCATCCCGATTCTCGCCGCCCTTAATGCGCGCCTGGGGGC CAATATCGGCTCCCCGGCCGCGGCGGCCACGGTGCTGTTTATCGTCGCCTTCGTGTCGGCAGCGATGATCATGATCGTGA CCGGACCCGAGGCGCTGCGGGCCATTCCAATGCAACCCAAGCACCTGTTCCTGGCGGGTGTTCTTGTGGCGTTTTATGTT CTCAGCATCACCTATGTTGCGCCGACTTTCGGGGTCGGGAACGCGGTCTTCTTTGTCCTATTGGGGCAATTGATCAGTTC CGCCGCCATCGATCACTTCGGCCTGTTCGGCGCGCAAGTGAATGCGGTGACCGGTCTGCGATTGCTGGGAATTGCCGTGA TGGCGCTTGGGGTGGCGATCACGCAACTCAGCCTGTCGCGTTAG
Upstream 100 bases:
>100_bases GGTCACGCCACTGCGCGAACGGGTCGACGACACGCCGATCTATCTGCCGTGGGAAGGTGCGCCGATCCGTGGTATTTGTT CCTAATCAAAGGGTTAAATC
Downstream 100 bases:
>100_bases CCGGCCTTCTCCTCCAGCGTTAACCATTCAAGCTCGGCCTCTTCCAGCAAGGCCTGCCGCTCCGCCAGCGCGTCACTGGC CTTTTGCGCCTTCACGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MPTQALIMVLAGIGIPILAALNARLGANIGSPAAAATVLFIVAFVSAAMIMIVTGPEALRAIPMQPKHLFLAGVLVAFYV LSITYVAPTFGVGNAVFFVLLGQLISSAAIDHFGLFGAQVNAVTGLRLLGIAVMALGVAITQLSLSR
Sequences:
>Translated_147_residues MPTQALIMVLAGIGIPILAALNARLGANIGSPAAAATVLFIVAFVSAAMIMIVTGPEALRAIPMQPKHLFLAGVLVAFYV LSITYVAPTFGVGNAVFFVLLGQLISSAAIDHFGLFGAQVNAVTGLRLLGIAVMALGVAITQLSLSR >Mature_146_residues PTQALIMVLAGIGIPILAALNARLGANIGSPAAAATVLFIVAFVSAAMIMIVTGPEALRAIPMQPKHLFLAGVLVAFYVL SITYVAPTFGVGNAVFFVLLGQLISSAAIDHFGLFGAQVNAVTGLRLLGIAVMALGVAITQLSLSR
Specific function: Unknown
COG id: COG3238
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15015; Mature: 14884
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTQALIMVLAGIGIPILAALNARLGANIGSPAAAATVLFIVAFVSAAMIMIVTGPEALR CCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEECHHHHH AIPMQPKHLFLAGVLVAFYVLSITYVAPTFGVGNAVFFVLLGQLISSAAIDHFGLFGAQV HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NAVTGLRLLGIAVMALGVAITQLSLSR HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PTQALIMVLAGIGIPILAALNARLGANIGSPAAAATVLFIVAFVSAAMIMIVTGPEALR CHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEECHHHHH AIPMQPKHLFLAGVLVAFYVLSITYVAPTFGVGNAVFFVLLGQLISSAAIDHFGLFGAQV HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NAVTGLRLLGIAVMALGVAITQLSLSR HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA