Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054393
Identifier: 89054393
GI number: 89054393
Start: 1892884
End: 1893276
Strand: Reverse
Name: 89054393
Synonym: Jann_1902
Alternate gene names: NA
Gene position: 1893276-1892884 (Counterclockwise)
Preceding gene: 89054394
Following gene: 89054388
Centisome position: 43.85
GC content: 63.61
Gene sequence:
>393_bases ATGCATCTGGCGCTGGTGACGTTGTTGGTGCCGGACTATGACGATGGCATGGCTTTTTTTGTGGCGGGTCTGGGGTGGGA TCTGCTCTCCGACGAAGATCAGGGCAGCAAACGCTGGGTCACGGTCGCTCCGCGCCCCGCCAGCTCCTCCTCGAAGAGCT GCGCTCTTCTCCTCGCAGTGGCCACGAGTGACTCACAGCGTAAGGCCGTTGGCCTACAGACCGGCGGTCGTGTGGGCTTT TTCCTGCATACCAATGACTTTGCCCACGATGCGGCACGGATCACCGCCGCCGGAGGGGCGTTTATCGAGGAGCCGCGGCA CGAGCCCTACGGCATTGTCGCCCAATGGCGCGACCCCTGGGGCAACCTTTGGGACCTGATCCAGCCCGCCTGA
Upstream 100 bases:
>100_bases GCAGCAGGTGGCCCAGATCACGCTGCCGGATCTTCGCGGGGAAAACGGGCGTAGCGACGGCCTGCGCGGCTTCAGTGACG GACCTTAGGGCGGCGGCAGG
Downstream 100 bases:
>100_bases CGGACCAGCGCCGAGAACATGCGGAGCATGGCGGAGGCGGTTGGTACGAAAAAGGGAGGCCGCAGGCCCCCCTTTCCGCA ATCTCGACCGGATTAACCTC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MHLALVTLLVPDYDDGMAFFVAGLGWDLLSDEDQGSKRWVTVAPRPASSSSKSCALLLAVATSDSQRKAVGLQTGGRVGF FLHTNDFAHDAARITAAGGAFIEEPRHEPYGIVAQWRDPWGNLWDLIQPA
Sequences:
>Translated_130_residues MHLALVTLLVPDYDDGMAFFVAGLGWDLLSDEDQGSKRWVTVAPRPASSSSKSCALLLAVATSDSQRKAVGLQTGGRVGF FLHTNDFAHDAARITAAGGAFIEEPRHEPYGIVAQWRDPWGNLWDLIQPA >Mature_130_residues MHLALVTLLVPDYDDGMAFFVAGLGWDLLSDEDQGSKRWVTVAPRPASSSSKSCALLLAVATSDSQRKAVGLQTGGRVGF FLHTNDFAHDAARITAAGGAFIEEPRHEPYGIVAQWRDPWGNLWDLIQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ywkD [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 14094; Mature: 14094
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLALVTLLVPDYDDGMAFFVAGLGWDLLSDEDQGSKRWVTVAPRPASSSSKSCALLLAV CCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEE ATSDSQRKAVGLQTGGRVGFFLHTNDFAHDAARITAAGGAFIEEPRHEPYGIVAQWRDPW ECCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCC GNLWDLIQPA CCHHHHCCCC >Mature Secondary Structure MHLALVTLLVPDYDDGMAFFVAGLGWDLLSDEDQGSKRWVTVAPRPASSSSKSCALLLAV CCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEE ATSDSQRKAVGLQTGGRVGFFLHTNDFAHDAARITAAGGAFIEEPRHEPYGIVAQWRDPW ECCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCC GNLWDLIQPA CCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1333793 [H]