Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is ilvI [H]
Identifier: 89054388
GI number: 89054388
Start: 1883652
End: 1885418
Strand: Reverse
Name: ilvI [H]
Synonym: Jann_1897
Alternate gene names: 89054388
Gene position: 1885418-1883652 (Counterclockwise)
Preceding gene: 89054393
Following gene: 89054387
Centisome position: 43.66
GC content: 60.95
Gene sequence:
>1767_bases ATGTCCCAGAGCACGTCACAGATGACCGGAGCAAAAATGATCGTCGAAGCCCTGAAGGAACAGGGTGTCGACACTGTATT TGGCTATCCCGGCGGTGCCGTCCTTCCGATCTATGACGAAATCTTCCAGCAAAACGCGATCCGCCACATTCTGGTGCGCC ACGAACAGGGCGCGGTTCATGCCGCCGAAGGCTATGCGCGGTCCACTGGCAAGCCGGGCGTGGTTCTGGTGACCTCCGGC CCTGGGGCCACGAATGCGGTGACCGGCCTGACCGACGCGCTGATGGACAGCATCCCGATCGTCTGCCTGACGGGTCAGGT GCCCACGTTCATGATCGGCTCCGATGCGTTTCAGGAAGCCGACACGGTCGGCATCACACGGCCCTGCACCAAGATGAACT GGCTAGTGAAGGAAACCGACCGTCTGGCCGACACCATTCACCAGGCCTTCCATATCGCCACGTCTGGCCGCCCCGGTCCC GTGTTGGTCGACATCCCCAAGGATGTGCAGTTTGCCACCGGCGACTACACCACCAAACCTAAGGCCAAGGTCAGCCACTA CCAGCCGAAGGTGAAGGGCGACATTGAGATGATCACCCGCCTTGTCGAGGCGATGGAGACCGCTGAACGCCCCCTCTTCT ATACTGGTGGCGGTGTGATCAATTCGGGCGACCATGCCAGCGCATTGCTGCGGGAGTTGGTGGAGGCCACGGGCTTTCCG ATCACCTCCACCCTGATGGGTCTGGGCGCTTATCCGGCGTCCGGCGAGAAGTGGATCGGCATGTTGGGGATGCACGGCAC CTATGAGGCCAATCTGGCCATGCATGGCTGTGACCTGATGATCAACGTCGGTGCGCGGTTCGATGACCGGATCACGGGTC GGATTGCAGATTTCTCTCCCGGCTCGCGCAAGGGCCACATCGACATCGACCCGTCGTCTATTAACAAAGTCATTCACGCC GATTTCCCGATCATCGGCGACGTGGGCCACGTGCTGGAAGATATCTTGCGCGTCTGGAAAGCCCGCGGGCGCAAGGCGGA TCGCACGTCGGTGCAGACCTGGTGGACCCAGATCGAGGCGTGGAAAGCCGTGCACTGCCTTGACTACAAGCCGTCCGAGA CCACGATCAAACCGCAATACGCGCTGGAACGGCTGGAGGCGCTGACCAAACATCGCAAGGACCGCTTCATCACGACCGAA GTGGGTCAGCACCAGATGTGGGCCGCGCAGTTTCTGGGCTTTGACGACCCGAACCGCTGGATGACCTCTGGCGGGCTCGG CACGATGGGCTACGGCGTGCCCGCATCGGTCGGCGTGCAGGTTGCGCATCCCGAGGGGCTGGTGATCAATGTCGCCGGTG AAGCCTCGTGGATGATGAACATGCAGGAAATGGGAACGGCGGCGCAGTACCGCCTGCCCGTCAAGCAGTTCATCCTGAAT AACGAACGCCTTGGCATGGTCCGCCAGTGGCAGGAATTGCTCCACGGCGAGCGTTATTCTGAAAGCTGGTCCGAGGCCCT GCCCGATTTCGTGAAGCTGGCCGAGGCCTTTGGTGCCAAGGGTATCTTGTGCTCCGACCCCAAGGATCTGGACGACGCGA TCATGGAGATGCTGAATTACGACGGCCCCGTGATCTTCGATTGTCTGGTCGAGAAGCACGAAAACTGCTTCCCGATGATC CCGTCCGGCAAAGCCCACAATGAAATGCTTCTGGGCGAGGCGGACACAGCGGGCGCCATTGGCGATGCGGGTGGGGTTTT GGTGTGA
Upstream 100 bases:
>100_bases ATTGGAACCATGCGCCCCCGGATAACCTCCGGGGGCTTTTTTTTGCATTATATATTCGCACACGACCGATGAAGCGCGAC ACAGAAGGAACAGGCGCCCC
Downstream 100 bases:
>100_bases CGTCGTCCGACAAACACGCCCTGCGATCATCCGAGCGTGAAGAATACCTGGAATACAATTTTCTGGGGGCCCTATGCTCA TATGGGTGGTCGCAGGACAG
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS-III; ALS-III; Acetohydroxy-acid synthase III large subunit [H]
Number of amino acids: Translated: 588; Mature: 587
Protein sequence:
>588_residues MSQSTSQMTGAKMIVEALKEQGVDTVFGYPGGAVLPIYDEIFQQNAIRHILVRHEQGAVHAAEGYARSTGKPGVVLVTSG PGATNAVTGLTDALMDSIPIVCLTGQVPTFMIGSDAFQEADTVGITRPCTKMNWLVKETDRLADTIHQAFHIATSGRPGP VLVDIPKDVQFATGDYTTKPKAKVSHYQPKVKGDIEMITRLVEAMETAERPLFYTGGGVINSGDHASALLRELVEATGFP ITSTLMGLGAYPASGEKWIGMLGMHGTYEANLAMHGCDLMINVGARFDDRITGRIADFSPGSRKGHIDIDPSSINKVIHA DFPIIGDVGHVLEDILRVWKARGRKADRTSVQTWWTQIEAWKAVHCLDYKPSETTIKPQYALERLEALTKHRKDRFITTE VGQHQMWAAQFLGFDDPNRWMTSGGLGTMGYGVPASVGVQVAHPEGLVINVAGEASWMMNMQEMGTAAQYRLPVKQFILN NERLGMVRQWQELLHGERYSESWSEALPDFVKLAEAFGAKGILCSDPKDLDDAIMEMLNYDGPVIFDCLVEKHENCFPMI PSGKAHNEMLLGEADTAGAIGDAGGVLV
Sequences:
>Translated_588_residues MSQSTSQMTGAKMIVEALKEQGVDTVFGYPGGAVLPIYDEIFQQNAIRHILVRHEQGAVHAAEGYARSTGKPGVVLVTSG PGATNAVTGLTDALMDSIPIVCLTGQVPTFMIGSDAFQEADTVGITRPCTKMNWLVKETDRLADTIHQAFHIATSGRPGP VLVDIPKDVQFATGDYTTKPKAKVSHYQPKVKGDIEMITRLVEAMETAERPLFYTGGGVINSGDHASALLRELVEATGFP ITSTLMGLGAYPASGEKWIGMLGMHGTYEANLAMHGCDLMINVGARFDDRITGRIADFSPGSRKGHIDIDPSSINKVIHA DFPIIGDVGHVLEDILRVWKARGRKADRTSVQTWWTQIEAWKAVHCLDYKPSETTIKPQYALERLEALTKHRKDRFITTE VGQHQMWAAQFLGFDDPNRWMTSGGLGTMGYGVPASVGVQVAHPEGLVINVAGEASWMMNMQEMGTAAQYRLPVKQFILN NERLGMVRQWQELLHGERYSESWSEALPDFVKLAEAFGAKGILCSDPKDLDDAIMEMLNYDGPVIFDCLVEKHENCFPMI PSGKAHNEMLLGEADTAGAIGDAGGVLV >Mature_587_residues SQSTSQMTGAKMIVEALKEQGVDTVFGYPGGAVLPIYDEIFQQNAIRHILVRHEQGAVHAAEGYARSTGKPGVVLVTSGP GATNAVTGLTDALMDSIPIVCLTGQVPTFMIGSDAFQEADTVGITRPCTKMNWLVKETDRLADTIHQAFHIATSGRPGPV LVDIPKDVQFATGDYTTKPKAKVSHYQPKVKGDIEMITRLVEAMETAERPLFYTGGGVINSGDHASALLRELVEATGFPI TSTLMGLGAYPASGEKWIGMLGMHGTYEANLAMHGCDLMINVGARFDDRITGRIADFSPGSRKGHIDIDPSSINKVIHAD FPIIGDVGHVLEDILRVWKARGRKADRTSVQTWWTQIEAWKAVHCLDYKPSETTIKPQYALERLEALTKHRKDRFITTEV GQHQMWAAQFLGFDDPNRWMTSGGLGTMGYGVPASVGVQVAHPEGLVINVAGEASWMMNMQEMGTAAQYRLPVKQFILNN ERLGMVRQWQELLHGERYSESWSEALPDFVKLAEAFGAKGILCSDPKDLDDAIMEMLNYDGPVIFDCLVEKHENCFPMIP SGKAHNEMLLGEADTAGAIGDAGGVLV
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=569, Percent_Identity=24.4288224956063, Blast_Score=148, Evalue=2e-35, Organism=Homo sapiens, GI21361361, Length=602, Percent_Identity=24.5847176079734, Blast_Score=140, Evalue=3e-33, Organism=Escherichia coli, GI87081685, Length=573, Percent_Identity=48.1675392670157, Blast_Score=556, Evalue=1e-159, Organism=Escherichia coli, GI1790104, Length=572, Percent_Identity=41.0839160839161, Blast_Score=436, Evalue=1e-123, Organism=Escherichia coli, GI1786717, Length=565, Percent_Identity=32.7433628318584, Blast_Score=314, Evalue=1e-86, Organism=Escherichia coli, GI1787096, Length=560, Percent_Identity=27.1428571428571, Blast_Score=180, Evalue=3e-46, Organism=Escherichia coli, GI1788716, Length=573, Percent_Identity=24.78184991274, Blast_Score=145, Evalue=6e-36, Organism=Caenorhabditis elegans, GI17531299, Length=570, Percent_Identity=25.0877192982456, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17531301, Length=570, Percent_Identity=25.0877192982456, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI17542570, Length=531, Percent_Identity=25.4237288135593, Blast_Score=119, Evalue=6e-27, Organism=Saccharomyces cerevisiae, GI6323755, Length=590, Percent_Identity=44.4067796610169, Blast_Score=486, Evalue=1e-138, Organism=Saccharomyces cerevisiae, GI6320816, Length=499, Percent_Identity=24.6492985971944, Blast_Score=103, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6321524, Length=545, Percent_Identity=23.6697247706422, Blast_Score=91, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6323073, Length=545, Percent_Identity=24.0366972477064, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6323163, Length=544, Percent_Identity=22.7941176470588, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI19922626, Length=549, Percent_Identity=25.8652094717668, Blast_Score=159, Evalue=5e-39,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 64129; Mature: 63998
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSTSQMTGAKMIVEALKEQGVDTVFGYPGGAVLPIYDEIFQQNAIRHILVRHEQGAVH CCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEE AAEGYARSTGKPGVVLVTSGPGATNAVTGLTDALMDSIPIVCLTGQVPTFMIGSDAFQEA HHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEECCHHHHHH DTVGITRPCTKMNWLVKETDRLADTIHQAFHIATSGRPGPVLVDIPKDVQFATGDYTTKP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCCCC KAKVSHYQPKVKGDIEMITRLVEAMETAERPLFYTGGGVINSGDHASALLRELVEATGFP CCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCC ITSTLMGLGAYPASGEKWIGMLGMHGTYEANLAMHGCDLMINVGARFDDRITGRIADFSP HHHHHHHCCCCCCCCCCEEEEECCCCCEECCEEEECCEEEEECCCCCCCCCCCEEECCCC GSRKGHIDIDPSSINKVIHADFPIIGDVGHVLEDILRVWKARGRKADRTSVQTWWTQIEA CCCCCEEEECHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH WKAVHCLDYKPSETTIKPQYALERLEALTKHRKDRFITTEVGQHQMWAAQFLGFDDPNRW HHHEEEECCCCCCCEECHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCCCCCCE MTSGGLGTMGYGVPASVGVQVAHPEGLVINVAGEASWMMNMQEMGTAAQYRLPVKQFILN EECCCCCCCCCCCCHHCCEEEECCCCEEEEECCCHHHHHHHHHHCCHHHHCCCHHHHHHC NERLGMVRQWQELLHGERYSESWSEALPDFVKLAEAFGAKGILCSDPKDLDDAIMEMLNY CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCC DGPVIFDCLVEKHENCFPMIPSGKAHNEMLLGEADTAGAIGDAGGVLV CCCEEHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure SQSTSQMTGAKMIVEALKEQGVDTVFGYPGGAVLPIYDEIFQQNAIRHILVRHEQGAVH CCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEE AAEGYARSTGKPGVVLVTSGPGATNAVTGLTDALMDSIPIVCLTGQVPTFMIGSDAFQEA HHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEECCHHHHHH DTVGITRPCTKMNWLVKETDRLADTIHQAFHIATSGRPGPVLVDIPKDVQFATGDYTTKP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCCCC KAKVSHYQPKVKGDIEMITRLVEAMETAERPLFYTGGGVINSGDHASALLRELVEATGFP CCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCC ITSTLMGLGAYPASGEKWIGMLGMHGTYEANLAMHGCDLMINVGARFDDRITGRIADFSP HHHHHHHCCCCCCCCCCEEEEECCCCCEECCEEEECCEEEEECCCCCCCCCCCEEECCCC GSRKGHIDIDPSSINKVIHADFPIIGDVGHVLEDILRVWKARGRKADRTSVQTWWTQIEA CCCCCEEEECHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH WKAVHCLDYKPSETTIKPQYALERLEALTKHRKDRFITTEVGQHQMWAAQFLGFDDPNRW HHHEEEECCCCCCCEECHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCCCCCCE MTSGGLGTMGYGVPASVGVQVAHPEGLVINVAGEASWMMNMQEMGTAAQYRLPVKQFILN EECCCCCCCCCCCCHHCCEEEECCCCEEEEECCCHHHHHHHHHHCCHHHHCCCHHHHHHC NERLGMVRQWQELLHGERYSESWSEALPDFVKLAEAFGAKGILCSDPKDLDDAIMEMLNY CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCC DGPVIFDCLVEKHENCFPMIPSGKAHNEMLLGEADTAGAIGDAGGVLV CCCEEHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6308579; 1630901; 9278503; 3891724; 9298646 [H]