Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is ilvH
Identifier: 89054384
GI number: 89054384
Start: 1881360
End: 1881917
Strand: Reverse
Name: ilvH
Synonym: Jann_1893
Alternate gene names: 89054384
Gene position: 1881917-1881360 (Counterclockwise)
Preceding gene: 89054385
Following gene: 89054383
Centisome position: 43.58
GC content: 62.01
Gene sequence:
>558_bases TTGGCCCTCAAAATCGAAAAAGGCTCCACCAGCCATTCCGCCTATGACCTGCGCTCGCATCTGTCCGATGTGATCGAGAC CCACACGCTTGCTATCCTTGTGGAGAATGAGCCGGGCGTGCTCGCCCGTGTCATCGGGCTCTTTGCGGGTCGGGGCTATA ACATCGAAAGCCTGACGGTGGCGGAGGTTGATCATCAGGGCGCGCGGTCGCGCATCACCATCGTCACGTCGGGCACGCCT CAGATCATCAACCAGATCAAGATGCAGCTGGAGCGGATGGTGCCCGTCCATGAGGTCGCCGACCTGACCGTTGACGGCCC CTTCATCAGCCGGGAGCTGTCCCTGATCAAGGTCGTTGCCAAGGGCGAACATCGGGTGGAAGCGCTGCGCATTGCCGAAA TCTTCCGCGCCAATGTCGTGGACAGCACGCTGGAAAGCTTTGTTTTCGAGATCACCGGCACGCCCGAGAAGATCGACGCC TTCTGCGACCTGATGCGACCTTTGGGGGAGGTGACGCTGGCGCGCACCGGCGTGGCCGCCATCGCGCGCGGCGTCTGA
Upstream 100 bases:
>100_bases TTACGGGCGTGCACTGCGCGAACGCACCGAGCAGATCTACTTCCCTCTGCCCTTCGCAGAGGCCTTTCCCCACTACATGC CCGAATAAGGAACCAAGACC
Downstream 100 bases:
>100_bases GCATGCGCGTCATTGGGGCGCTTTTCCTGGCGGGCGTGCTGAGCCTGCCCGCAACGGCCGAGACGTTTCTGGGTGTCACG TTGGGCGCGCCGATCCCCGA
Product: acetolactate synthase 3 regulatory subunit
Products: NA
Alternate protein names: Acetohydroxy-acid synthase small subunit; AHAS; ALS [H]
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MALKIEKGSTSHSAYDLRSHLSDVIETHTLAILVENEPGVLARVIGLFAGRGYNIESLTVAEVDHQGARSRITIVTSGTP QIINQIKMQLERMVPVHEVADLTVDGPFISRELSLIKVVAKGEHRVEALRIAEIFRANVVDSTLESFVFEITGTPEKIDA FCDLMRPLGEVTLARTGVAAIARGV
Sequences:
>Translated_185_residues MALKIEKGSTSHSAYDLRSHLSDVIETHTLAILVENEPGVLARVIGLFAGRGYNIESLTVAEVDHQGARSRITIVTSGTP QIINQIKMQLERMVPVHEVADLTVDGPFISRELSLIKVVAKGEHRVEALRIAEIFRANVVDSTLESFVFEITGTPEKIDA FCDLMRPLGEVTLARTGVAAIARGV >Mature_184_residues ALKIEKGSTSHSAYDLRSHLSDVIETHTLAILVENEPGVLARVIGLFAGRGYNIESLTVAEVDHQGARSRITIVTSGTPQ IINQIKMQLERMVPVHEVADLTVDGPFISRELSLIKVVAKGEHRVEALRIAEIFRANVVDSTLESFVFEITGTPEKIDAF CDLMRPLGEVTLARTGVAAIARGV
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0440
COG function: function code E; Acetolactate synthase, small (regulatory) subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1786266, Length=156, Percent_Identity=44.2307692307692, Blast_Score=121, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6319837, Length=207, Percent_Identity=30.9178743961353, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004789 - InterPro: IPR019455 - InterPro: IPR002912 [H]
Pfam domain/function: PF01842 ACT; PF10369 ALS_ss_C [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 20156; Mature: 20024
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKIEKGSTSHSAYDLRSHLSDVIETHTLAILVENEPGVLARVIGLFAGRGYNIESLTV CEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEE AEVDHQGARSRITIVTSGTPQIINQIKMQLERMVPVHEVADLTVDGPFISRELSLIKVVA EECCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHCCEECCCHHHHHHHHHHHHH KGEHRVEALRIAEIFRANVVDSTLESFVFEITGTPEKIDAFCDLMRPLGEVTLARTGVAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IARGV HHCCC >Mature Secondary Structure ALKIEKGSTSHSAYDLRSHLSDVIETHTLAILVENEPGVLARVIGLFAGRGYNIESLTV EEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEE AEVDHQGARSRITIVTSGTPQIINQIKMQLERMVPVHEVADLTVDGPFISRELSLIKVVA EECCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHCCEECCCHHHHHHHHHHHHH KGEHRVEALRIAEIFRANVVDSTLESFVFEITGTPEKIDAFCDLMRPLGEVTLARTGVAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IARGV HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]