Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054361
Identifier: 89054361
GI number: 89054361
Start: 1857201
End: 1857710
Strand: Reverse
Name: 89054361
Synonym: Jann_1870
Alternate gene names: NA
Gene position: 1857710-1857201 (Counterclockwise)
Preceding gene: 89054363
Following gene: 89054357
Centisome position: 43.02
GC content: 60.78
Gene sequence:
>510_bases ATGCCGCCCCAACACCGCAAAAACGTGCCACACCCGCCGCGCAGAGGCCCGGGCCTCTCCCTAATCTGGGCACATTTGGA CCCGCATATGGAGACCATGACAGATACATTTGAACATGCCACACGTCCCGGCAGCGCCGGCCTTAGCGTCCTCAGTTTTG TAGGACTAAGCGCCCTCACCGTCTTTCTTTGGCAATTCTCCCCCGGCTTTGTGCTGTTGCTCATGGTGCCAGCGCTCCTG ATCTGCCTGTGGCAGGTCACGCGGGTGCCGACCTATGGCATCAAGATGATGCCCGACACCTGGCGCGTTCTGGACGGGGC CAATGACATTGTCATCCCCACGGCAGAGATCACCTACCTCCGGGTCGTGGATCATGGCAACAATCGCCGCATCGGTCTGA TGTTGAACGACGGGACAGAACTGGTTCTGCCGGTCGAATGCCTGCCGGACCCCTATGACCTGATCCGCGAAGCGACCAAC CGGGGCATCCCGGTCCGCCAACAGGCCTGA
Upstream 100 bases:
>100_bases TGGGCCGGGCCCGGTTTGCCGCGCGGTTCGGTCTGAAGCGACCGCCCGGAAGCGGACGCGCCACGCCAATTGTGGCAACG GCCGGACCGCCCCCATACTC
Downstream 100 bases:
>100_bases ACCGCCTGATCTGTCAAAGGTCGGTCGGACGCGGCACCGGGCGGTTTGACCCGGCGGCCGCGACCGGCGCCACCTCTGCC AAACGCTCCGGGCGCATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MPPQHRKNVPHPPRRGPGLSLIWAHLDPHMETMTDTFEHATRPGSAGLSVLSFVGLSALTVFLWQFSPGFVLLLMVPALL ICLWQVTRVPTYGIKMMPDTWRVLDGANDIVIPTAEITYLRVVDHGNNRRIGLMLNDGTELVLPVECLPDPYDLIREATN RGIPVRQQA
Sequences:
>Translated_169_residues MPPQHRKNVPHPPRRGPGLSLIWAHLDPHMETMTDTFEHATRPGSAGLSVLSFVGLSALTVFLWQFSPGFVLLLMVPALL ICLWQVTRVPTYGIKMMPDTWRVLDGANDIVIPTAEITYLRVVDHGNNRRIGLMLNDGTELVLPVECLPDPYDLIREATN RGIPVRQQA >Mature_168_residues PPQHRKNVPHPPRRGPGLSLIWAHLDPHMETMTDTFEHATRPGSAGLSVLSFVGLSALTVFLWQFSPGFVLLLMVPALLI CLWQVTRVPTYGIKMMPDTWRVLDGANDIVIPTAEITYLRVVDHGNNRRIGLMLNDGTELVLPVECLPDPYDLIREATNR GIPVRQQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18908; Mature: 18777
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPQHRKNVPHPPRRGPGLSLIWAHLDPHMETMTDTFEHATRPGSAGLSVLSFVGLSALT CCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VFLWQFSPGFVLLLMVPALLICLWQVTRVPTYGIKMMPDTWRVLDGANDIVIPTAEITYL HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHCCCCCEEEECCCEEEE RVVDHGNNRRIGLMLNDGTELVLPVECLPDPYDLIREATNRGIPVRQQA EEEECCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PPQHRKNVPHPPRRGPGLSLIWAHLDPHMETMTDTFEHATRPGSAGLSVLSFVGLSALT CCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VFLWQFSPGFVLLLMVPALLICLWQVTRVPTYGIKMMPDTWRVLDGANDIVIPTAEITYL HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHCCCCCEEEECCCEEEE RVVDHGNNRRIGLMLNDGTELVLPVECLPDPYDLIREATNRGIPVRQQA EEEECCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA