Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is yhiN [H]
Identifier: 89054351
GI number: 89054351
Start: 1847563
End: 1848708
Strand: Reverse
Name: yhiN [H]
Synonym: Jann_1860
Alternate gene names: 89054351
Gene position: 1848708-1847563 (Counterclockwise)
Preceding gene: 89054352
Following gene: 89054349
Centisome position: 42.81
GC content: 63.18
Gene sequence:
>1146_bases ATGGTCCACCACGTCCAAACCCTCATTCTCGGCGCCGGGGCCGCTGGCCTCATGTGTGCCGCCCATGCCGGGCCGGACAC GCTGGTGGTTGACCACGCTAAGGCCCCGGGCGAGAAGATCCGCATCTCCGGTGGCGGGCGCTGCAACTTCACCAATATGT ATGCGGAACCGGCGAATTTCTTAAGCGAAAACATCCACTTCGCCAAGTCCGCCCTATCGCGCTACACGCAATGGGACTTC CTCGATCTCGTCCAGAAACACGACATTCCCTACCATGAGAAAACCCTGGGCCAGCTCTTCTGCGACCGCTCCGCCAAGGA CATCATCGCCATGCTTCTGGCGGAAATGGGCCCGGCCAAGCTTTGGCTCCAGACCGACATCGGTGAGGTGGCCCATCGCG ACGGCCTCTTCCACGTCACGCTGACGCGAGAGGGCAAACGTCACGGCGTCACCGCCCGCAATCTCGTGCTCGCCACGGGC GGGAAATCCATCCCCAAAATGGGCGCCACCGGCCTGGCCTACCGCATCGCAGAGCAATTCGGCCACCGCATCACCGACAC CCGCCCTGCCCTTGTCCCATTGACGTTTGAGGGCGAGGTGAAGGCGCAATTCGCCGCTTTGTCCGGCACTTCGGTGCCCG CGCGCGTGGCCTGCAACGGCACCCGTTTTGACGAGGGGATGCTGTTCACGCATCGGGGGCTGTCGGGCCCGTCGATCCTG CAAATCTCATCCTATTGGGCGGAGGGCGATACGTTGTCGCTGCATCTTCTGCCCGAAGCGGACCTGTTTGAGGTGCTTCG TGCCCGTCGCACGCAGGCTGGCGGCAAGGCGCTCACCAGCGTTTTGGCCGAGCTTTTGCCGAAGAAACTCGTGGCCCATC TGGCGGAGGTTTGGGGCCTGACCGGCAACCTTGCCGATCAATCCGATATCGCCTTGCGCGCCCTGACCGACCAGCTCACC GCCTGGCCCGTTACGCCGACCTCGTCGGAGGGCTACCGCACCGCTGAAGTCACGCTCGGCGGCATCGCGACTGAAGGGAT GTCCTCAAAAACCATGGAAAGCCAGCATGTTAAGGGCCTCTACGTGATCGGAGAGGCGGTGGACGTGACCGGCTGGCTGG GGGGATACAACTTCCAATGGGCGTAG
Upstream 100 bases:
>100_bases GGACGAGGACCGCCTGCAAGAGGTTGTCTGGGCGTGGGATCAGTTGAAGGTCAGCCGCAACTTCGCCGACTGACAGCGCG GTCTTGCCTGAGGGCTCCCT
Downstream 100 bases:
>100_bases TCGTCGGGCGTTGCGGCGGGCCGCGCGATCCAACATGCCTGAGCCCGCTTCACGCCCGCCAGAACGTCGCCGTGAACAAC ACCAGCACCGCCATCAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MVHHVQTLILGAGAAGLMCAAHAGPDTLVVDHAKAPGEKIRISGGGRCNFTNMYAEPANFLSENIHFAKSALSRYTQWDF LDLVQKHDIPYHEKTLGQLFCDRSAKDIIAMLLAEMGPAKLWLQTDIGEVAHRDGLFHVTLTREGKRHGVTARNLVLATG GKSIPKMGATGLAYRIAEQFGHRITDTRPALVPLTFEGEVKAQFAALSGTSVPARVACNGTRFDEGMLFTHRGLSGPSIL QISSYWAEGDTLSLHLLPEADLFEVLRARRTQAGGKALTSVLAELLPKKLVAHLAEVWGLTGNLADQSDIALRALTDQLT AWPVTPTSSEGYRTAEVTLGGIATEGMSSKTMESQHVKGLYVIGEAVDVTGWLGGYNFQWA
Sequences:
>Translated_381_residues MVHHVQTLILGAGAAGLMCAAHAGPDTLVVDHAKAPGEKIRISGGGRCNFTNMYAEPANFLSENIHFAKSALSRYTQWDF LDLVQKHDIPYHEKTLGQLFCDRSAKDIIAMLLAEMGPAKLWLQTDIGEVAHRDGLFHVTLTREGKRHGVTARNLVLATG GKSIPKMGATGLAYRIAEQFGHRITDTRPALVPLTFEGEVKAQFAALSGTSVPARVACNGTRFDEGMLFTHRGLSGPSIL QISSYWAEGDTLSLHLLPEADLFEVLRARRTQAGGKALTSVLAELLPKKLVAHLAEVWGLTGNLADQSDIALRALTDQLT AWPVTPTSSEGYRTAEVTLGGIATEGMSSKTMESQHVKGLYVIGEAVDVTGWLGGYNFQWA >Mature_381_residues MVHHVQTLILGAGAAGLMCAAHAGPDTLVVDHAKAPGEKIRISGGGRCNFTNMYAEPANFLSENIHFAKSALSRYTQWDF LDLVQKHDIPYHEKTLGQLFCDRSAKDIIAMLLAEMGPAKLWLQTDIGEVAHRDGLFHVTLTREGKRHGVTARNLVLATG GKSIPKMGATGLAYRIAEQFGHRITDTRPALVPLTFEGEVKAQFAALSGTSVPARVACNGTRFDEGMLFTHRGLSGPSIL QISSYWAEGDTLSLHLLPEADLFEVLRARRTQAGGKALTSVLAELLPKKLVAHLAEVWGLTGNLADQSDIALRALTDQLT AWPVTPTSSEGYRTAEVTLGGIATEGMSSKTMESQHVKGLYVIGEAVDVTGWLGGYNFQWA
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=370, Percent_Identity=50.8108108108108, Blast_Score=355, Evalue=3e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 41126; Mature: 41126
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHHVQTLILGAGAAGLMCAAHAGPDTLVVDHAKAPGEKIRISGGGRCNFTNMYAEPANF CCCHHEEHEECCCCHHHEEEECCCCCEEEEECCCCCCCEEEECCCCEECCCCCCCCHHHH LSENIHFAKSALSRYTQWDFLDLVQKHDIPYHEKTLGQLFCDRSAKDIIAMLLAEMGPAK HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCE LWLQTDIGEVAHRDGLFHVTLTREGKRHGVTARNLVLATGGKSIPKMGATGLAYRIAEQF EEEECCHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH GHRITDTRPALVPLTFEGEVKAQFAALSGTSVPARVACNGTRFDEGMLFTHRGLSGPSIL CCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEECCCCCCCEE QISSYWAEGDTLSLHLLPEADLFEVLRARRTQAGGKALTSVLAELLPKKLVAHLAEVWGL EEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC TGNLADQSDIALRALTDQLTAWPVTPTSSEGYRTAEVTLGGIATEGMSSKTMESQHVKGL CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCEECCCCCCCCHHHHCCCEE YVIGEAVDVTGWLGGYNFQWA EEEECEEEEEEECCCCCCCCC >Mature Secondary Structure MVHHVQTLILGAGAAGLMCAAHAGPDTLVVDHAKAPGEKIRISGGGRCNFTNMYAEPANF CCCHHEEHEECCCCHHHEEEECCCCCEEEEECCCCCCCEEEECCCCEECCCCCCCCHHHH LSENIHFAKSALSRYTQWDFLDLVQKHDIPYHEKTLGQLFCDRSAKDIIAMLLAEMGPAK HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCE LWLQTDIGEVAHRDGLFHVTLTREGKRHGVTARNLVLATGGKSIPKMGATGLAYRIAEQF EEEECCHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH GHRITDTRPALVPLTFEGEVKAQFAALSGTSVPARVACNGTRFDEGMLFTHRGLSGPSIL CCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEECCCCCCCEE QISSYWAEGDTLSLHLLPEADLFEVLRARRTQAGGKALTSVLAELLPKKLVAHLAEVWGL EEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC TGNLADQSDIALRALTDQLTAWPVTPTSSEGYRTAEVTLGGIATEGMSSKTMESQHVKGL CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCEECCCCCCCCHHHHCCCEE YVIGEAVDVTGWLGGYNFQWA EEEECEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]