Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054344
Identifier: 89054344
GI number: 89054344
Start: 1840144
End: 1841079
Strand: Reverse
Name: 89054344
Synonym: Jann_1853
Alternate gene names: NA
Gene position: 1841079-1840144 (Counterclockwise)
Preceding gene: 89054349
Following gene: 89054343
Centisome position: 42.64
GC content: 61.75
Gene sequence:
>936_bases ATGGCAAAGCGCTTCGGGGGCCAACACAGCCCCACAGGTCAAAGAGACGGCGATACCCCGCGCGAGATGGTGAGCCATCA GAAGATGGAGATTGCCCCCTTCAAGGGTCGCAAACCCATGCGGCACGGGGCCAAGCTGAACATCCTGTTCATCCTGCCAC TGCTGACGATCTTCTCCGTGCTGTTCAACTCCGGCGTGCTGGAAATGGCCACGGATCTGGCGGGCGGCGCGGTTCTGCTG TTGTCGGCCTGGCTGACGCGCGACGGCGTGCGGGCAGAAGATGCCTTCAACGAGCGCAAGGTCGCCCGCAAGCCCGCGAT CCCGCGCAAGATTTTTGGCGCTGTCGGCACCGGGTTGGGCGTGGCGCTGCTGATTTTGGGCGGGTCGAATTATGGCGTGC AATCGCTGGTATCCGCCAATGTTGTGGGCATCCTGGCCGCGGCCCTTCACCTGTTCTCCTTCGGGCTCGACCCCCTGAAA AACAAGGGGATGGAGGGGATGGACACCTTCACTTCGGACCGCGTGGCGCGCAAGATCGATGAGGCCGAGGCGCTTCTGGC AGAGCAAAAAGACGCCATCGCGAGGGTGCGCGACCCGCAGTTGGAGGCGCGCGTGGAGCGGTTCCAGGACGTGGCGCGCG GCCTGTTCCGCCAGGTGGAAGAAGATCCCCGGGATCTGAATGCGGCCCGCCGTTATCTGGGCGTCTATCTGCAAGGCGCG CGCGATGCGACGGTGCAATTCGCCAACCTCTACAGTCGCAAGACCGACTACAAGGTGCGCAGCGATTACATCGCCTTCCT CGACGATCTCGAACAGAATTTCGCGGCCCGGAAAGAGACGCTTCTGATCGACGATCGCACCAATTTCGACGTGGAGATTG AAGTCCTGCAAGACCGCCTGAACCGCGAAACACAATATCTGGAACGACAGGGATAA
Upstream 100 bases:
>100_bases GGGCCCACATGTCATCCACCTTTCTTCAAGGCGTATCCTTCTTCGTGCTCGTTCTGGTGATCCTGGGCGCGATCTTCGGC GGATTTGGGGTCCTTTAACC
Downstream 100 bases:
>100_bases GATTATGGAAACCGAGACACACCAAAAGGCCCAAGAGGTCGAAACGATGGTTGAAGAACTGAACGCAATCGTTTTGCCGG AACCCGCCGCGGACCTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MAKRFGGQHSPTGQRDGDTPREMVSHQKMEIAPFKGRKPMRHGAKLNILFILPLLTIFSVLFNSGVLEMATDLAGGAVLL LSAWLTRDGVRAEDAFNERKVARKPAIPRKIFGAVGTGLGVALLILGGSNYGVQSLVSANVVGILAAALHLFSFGLDPLK NKGMEGMDTFTSDRVARKIDEAEALLAEQKDAIARVRDPQLEARVERFQDVARGLFRQVEEDPRDLNAARRYLGVYLQGA RDATVQFANLYSRKTDYKVRSDYIAFLDDLEQNFAARKETLLIDDRTNFDVEIEVLQDRLNRETQYLERQG
Sequences:
>Translated_311_residues MAKRFGGQHSPTGQRDGDTPREMVSHQKMEIAPFKGRKPMRHGAKLNILFILPLLTIFSVLFNSGVLEMATDLAGGAVLL LSAWLTRDGVRAEDAFNERKVARKPAIPRKIFGAVGTGLGVALLILGGSNYGVQSLVSANVVGILAAALHLFSFGLDPLK NKGMEGMDTFTSDRVARKIDEAEALLAEQKDAIARVRDPQLEARVERFQDVARGLFRQVEEDPRDLNAARRYLGVYLQGA RDATVQFANLYSRKTDYKVRSDYIAFLDDLEQNFAARKETLLIDDRTNFDVEIEVLQDRLNRETQYLERQG >Mature_310_residues AKRFGGQHSPTGQRDGDTPREMVSHQKMEIAPFKGRKPMRHGAKLNILFILPLLTIFSVLFNSGVLEMATDLAGGAVLLL SAWLTRDGVRAEDAFNERKVARKPAIPRKIFGAVGTGLGVALLILGGSNYGVQSLVSANVVGILAAALHLFSFGLDPLKN KGMEGMDTFTSDRVARKIDEAEALLAEQKDAIARVRDPQLEARVERFQDVARGLFRQVEEDPRDLNAARRYLGVYLQGAR DATVQFANLYSRKTDYKVRSDYIAFLDDLEQNFAARKETLLIDDRTNFDVEIEVLQDRLNRETQYLERQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34711; Mature: 34580
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRFGGQHSPTGQRDGDTPREMVSHQKMEIAPFKGRKPMRHGAKLNILFILPLLTIFSV CCCCCCCCCCCCCCCCCCCHHHHHCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH LFNSGVLEMATDLAGGAVLLLSAWLTRDGVRAEDAFNERKVARKPAIPRKIFGAVGTGLG HHCCCHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VALLILGGSNYGVQSLVSANVVGILAAALHLFSFGLDPLKNKGMEGMDTFTSDRVARKID HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHH EAEALLAEQKDAIARVRDPQLEARVERFQDVARGLFRQVEEDPRDLNAARRYLGVYLQGA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC RDATVQFANLYSRKTDYKVRSDYIAFLDDLEQNFAARKETLLIDDRTNFDVEIEVLQDRL CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHH NRETQYLERQG HHHHHHHHCCC >Mature Secondary Structure AKRFGGQHSPTGQRDGDTPREMVSHQKMEIAPFKGRKPMRHGAKLNILFILPLLTIFSV CCCCCCCCCCCCCCCCCCHHHHHCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH LFNSGVLEMATDLAGGAVLLLSAWLTRDGVRAEDAFNERKVARKPAIPRKIFGAVGTGLG HHCCCHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VALLILGGSNYGVQSLVSANVVGILAAALHLFSFGLDPLKNKGMEGMDTFTSDRVARKID HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHH EAEALLAEQKDAIARVRDPQLEARVERFQDVARGLFRQVEEDPRDLNAARRYLGVYLQGA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC RDATVQFANLYSRKTDYKVRSDYIAFLDDLEQNFAARKETLLIDDRTNFDVEIEVLQDRL CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHH NRETQYLERQG HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA