Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054314
Identifier: 89054314
GI number: 89054314
Start: 1812286
End: 1812705
Strand: Reverse
Name: 89054314
Synonym: Jann_1823
Alternate gene names: NA
Gene position: 1812705-1812286 (Counterclockwise)
Preceding gene: 89054315
Following gene: 89054312
Centisome position: 41.98
GC content: 61.9
Gene sequence:
>420_bases ATGGCGCAGCCCTCCCTGATCCGCGAAGTGGAAGACCTTGAACGGCTGGCCAATCAGCTCGACAGCGCCTTTCGCATCCC CGGCACATCGTTCCGCGTCGGCTATGATGCCATCGTCGGGTTGGTCCCCGGGGTCGGCGATGCGCTGACTTTCGCGCCGT CCGCTTATATCGTGTGGAAGGCCCATCAATTAGGTGTGGGCTGGCCGCGTTTGCTGCGGATGAGCGCCAATGTCGCCGTC GATACGATGATTGGCGGCATCCCCCTGTTAGGCGATGTCTTCGACGCGGCGTTCAAGTCCAACCGCCGCAATGTGGCGCT CGTCCGTGATTTTGCGGAGCGCGAAACAATCCCCACGATCTACGAAAAAGGGCCGCGCAACAGCACGGCCCGAATTCATC ACACGGCGGTGGCCGTCTAG
Upstream 100 bases:
>100_bases GCACTTCTGGCTCAATATCGTGCTGACGATCCTCGGTTATCTTCCTGGCATTCTGCACGCTCTCTATATAATTGCGCGCA CGCCGCGGACGGCCTGATCC
Downstream 100 bases:
>100_bases GCCTCAGCCAACCAGCTCAAGGCCCGAGAAAAAGAACGCGATCTCTTCGGCAGCCGTCTCGGGCGCGTCGGAGCCGTGAA CGGAATTCTCGCCAATCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MAQPSLIREVEDLERLANQLDSAFRIPGTSFRVGYDAIVGLVPGVGDALTFAPSAYIVWKAHQLGVGWPRLLRMSANVAV DTMIGGIPLLGDVFDAAFKSNRRNVALVRDFAERETIPTIYEKGPRNSTARIHHTAVAV
Sequences:
>Translated_139_residues MAQPSLIREVEDLERLANQLDSAFRIPGTSFRVGYDAIVGLVPGVGDALTFAPSAYIVWKAHQLGVGWPRLLRMSANVAV DTMIGGIPLLGDVFDAAFKSNRRNVALVRDFAERETIPTIYEKGPRNSTARIHHTAVAV >Mature_138_residues AQPSLIREVEDLERLANQLDSAFRIPGTSFRVGYDAIVGLVPGVGDALTFAPSAYIVWKAHQLGVGWPRLLRMSANVAVD TMIGGIPLLGDVFDAAFKSNRRNVALVRDFAERETIPTIYEKGPRNSTARIHHTAVAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15172; Mature: 15040
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQPSLIREVEDLERLANQLDSAFRIPGTSFRVGYDAIVGLVPGVGDALTFAPSAYIVWK CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCHHHCCCCEEEEEE AHQLGVGWPRLLRMSANVAVDTMIGGIPLLGDVFDAAFKSNRRNVALVRDFAERETIPTI ECCCCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHH YEKGPRNSTARIHHTAVAV HHCCCCCCCCEEEEEEECC >Mature Secondary Structure AQPSLIREVEDLERLANQLDSAFRIPGTSFRVGYDAIVGLVPGVGDALTFAPSAYIVWK CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCHHHCCCCEEEEEE AHQLGVGWPRLLRMSANVAVDTMIGGIPLLGDVFDAAFKSNRRNVALVRDFAERETIPTI ECCCCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHH YEKGPRNSTARIHHTAVAV HHCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA