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The map label for this gene is 89054308

Identifier: 89054308

GI number: 89054308

Start: 1807252

End: 1807830

Strand: Reverse

Name: 89054308

Synonym: Jann_1817

Alternate gene names: NA

Gene position: 1807830-1807252 (Counterclockwise)

Preceding gene: 89054309

Following gene: 89054305

Centisome position: 41.87

GC content: 61.14

Gene sequence:

>579_bases
ATGGACAGCCAAGACATCCCCCGCCTCGTTTATCTGATCGTGCTGCTCTGTGCGGTTGGCGGCTATTTCTTCTGGGGTCA
GCGCCGGAACATGGGGCAAATGGCGCGATATCTGGCGATCTGGGGCTTCATTTTCCTGGGATTCATCGTCGCGATTGGCC
TTTGGACTGATCTGTCGAACTCCATGGCGCCGCGCCAATCGGTGATGCAGACTGGCGCGGTCGAGGTCCCTCGCGCCTCG
GACGGGCACTTTTACCTGACCCTCGATGTGAACAGCGTACCCACGCGCTTTGTGGTGGATACCGGCGCTACGGCGATTGT
GTTGAGCCAGGCCGACGCCGCGCGTGCAGGCCTTGATATCGACAATCTGATTTACTCGGGCCGGGCTGAGACCGCCAATG
GCCGGGTCGAGACCGCCCCCGCCCGTATCGAGACCCTGTCTTTGAACGGGATCGTGGACGAGAATGTGCGTGCCATCGTC
AATGCCGGAGAGATGGACGGCAGTCTTCTGGGCATGTCCTACCTGTCCCGTTTCTCGCGGCTGGAGATCGCGGATGGGCG
GCTGATCCTGCAACGCTAG

Upstream 100 bases:

>100_bases
CGCGCCTTCTGGGCATGTTATTGGCGGCGCTGTCGGTGCAATTCGTCATTGACGGCCTGCGGGACCTACAAGTCATCTGA
GCCGGGCCTATATTCTTTCC

Downstream 100 bases:

>100_bases
TCGCGTTTGCTCTCCGCCTTCATCTCCCACCGCCCCGATGCCTCGGACCAGTATTTCGCAGCAACGCCTGCCGCCGTCAG
GGTCTTCCACTGCTCTCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MDSQDIPRLVYLIVLLCAVGGYFFWGQRRNMGQMARYLAIWGFIFLGFIVAIGLWTDLSNSMAPRQSVMQTGAVEVPRAS
DGHFYLTLDVNSVPTRFVVDTGATAIVLSQADAARAGLDIDNLIYSGRAETANGRVETAPARIETLSLNGIVDENVRAIV
NAGEMDGSLLGMSYLSRFSRLEIADGRLILQR

Sequences:

>Translated_192_residues
MDSQDIPRLVYLIVLLCAVGGYFFWGQRRNMGQMARYLAIWGFIFLGFIVAIGLWTDLSNSMAPRQSVMQTGAVEVPRAS
DGHFYLTLDVNSVPTRFVVDTGATAIVLSQADAARAGLDIDNLIYSGRAETANGRVETAPARIETLSLNGIVDENVRAIV
NAGEMDGSLLGMSYLSRFSRLEIADGRLILQR
>Mature_192_residues
MDSQDIPRLVYLIVLLCAVGGYFFWGQRRNMGQMARYLAIWGFIFLGFIVAIGLWTDLSNSMAPRQSVMQTGAVEVPRAS
DGHFYLTLDVNSVPTRFVVDTGATAIVLSQADAARAGLDIDNLIYSGRAETANGRVETAPARIETLSLNGIVDENVRAIV
NAGEMDGSLLGMSYLSRFSRLEIADGRLILQR

Specific function: Unknown

COG id: COG3577

COG function: function code R; Predicted aspartyl protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018061
- InterPro:   IPR011969
- InterPro:   IPR021109
- InterPro:   IPR001969 [H]

Pfam domain/function: PF00077 RVP [H]

EC number: NA

Molecular weight: Translated: 21008; Mature: 21008

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSQDIPRLVYLIVLLCAVGGYFFWGQRRNMGQMARYLAIWGFIFLGFIVAIGLWTDLSN
CCCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SMAPRQSVMQTGAVEVPRASDGHFYLTLDVNSVPTRFVVDTGATAIVLSQADAARAGLDI
CCCHHHHHHHCCCEECCCCCCCEEEEEEECCCCCCEEEEECCCEEEEEECCCHHHHCCCH
DNLIYSGRAETANGRVETAPARIETLSLNGIVDENVRAIVNAGEMDGSLLGMSYLSRFSR
HHHHCCCCCCCCCCEEEECCCEEEEEEECCCCCCCHHHEEECCCCCCHHHHHHHHHHHHH
LEIADGRLILQR
EEECCCEEEECC
>Mature Secondary Structure
MDSQDIPRLVYLIVLLCAVGGYFFWGQRRNMGQMARYLAIWGFIFLGFIVAIGLWTDLSN
CCCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SMAPRQSVMQTGAVEVPRASDGHFYLTLDVNSVPTRFVVDTGATAIVLSQADAARAGLDI
CCCHHHHHHHCCCEECCCCCCCEEEEEEECCCCCCEEEEECCCEEEEEECCCHHHHCCCH
DNLIYSGRAETANGRVETAPARIETLSLNGIVDENVRAIVNAGEMDGSLLGMSYLSRFSR
HHHHCCCCCCCCCCEEEECCCEEEEEEECCCCCCCHHHEEECCCCCCHHHHHHHHHHHHH
LEIADGRLILQR
EEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]