Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
---|---|
Accession | NC_007802 |
Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89054305
Identifier: 89054305
GI number: 89054305
Start: 1804014
End: 1805129
Strand: Reverse
Name: 89054305
Synonym: Jann_1814
Alternate gene names: NA
Gene position: 1805129-1804014 (Counterclockwise)
Preceding gene: 89054308
Following gene: 89054304
Centisome position: 41.8
GC content: 63.08
Gene sequence:
>1116_bases GTGGGTCAGTACGACCGATATATATTGCGACAGCTTGTGGCGCTGTTTGGCTTCTTCAGCCTGGTGCTGGTGTCGGTCTA TTGGGTCAACCAGGCCGCGCGCCTGTTCGACAGGTTGATTGCCGACGGCCAGAATATCGGCGTGTTCCTTGAGTTTTCGG CCCTCACGCTGCCCTGGATCGTGCAGCTGATCCTGCCGGTCTCGGCCTTTGTGGCGACGCTCTACATCTTCAACCGCATG ATCAGCGAGAGTGAGCTGGTCGTGCTGCAAACCGCAGGTCTGTCGGCCCTGCGCCTGCTGCGGCCGGTGTTTGTCTTCGG GTGCCTGCTGGCAATCCTTCTGGCCGTGCTGGTCAATATCCTCGCCCCAACGGCGCGGGGACAATTCACCCAGCGCCAGG CCGAGGTGCAAGATGATCTGACAGGCCGGTTCCTGCGTGCCGGAGAGTTCATTCACCCCGCCGCTGGCCTGACCGTCTAC ATTCGTGAGATCAGTGAGTTGGGGGAGTTTCGCGACCTCTTTCTGCAAGACGCCTCCACCCCGGGCGTGGAAGTCACCTA CACGGCGAACACGGCCCTTCTGGTGCGCTCGGATACTGGCCCGCGTCTGGTGATGTTTGACGGCGTGGCGCAGACGCTGG ATCTGGACACGGGCCGCCTCTCCACCATTTCGTTCAGCGATTTCACCTATTCCGTCGGGACGCTCGGGGGCACAGGCGCG CGGCAGATCGACGTGAGGGAACTGCCAACGCCCCTTTTGTTGCGGGCAAATCAACAGATCGCGGGCGCGCTGAACCTGCC CCTGTCGCATCTGGTGTTTGAGGGGCATGACCGCCTGGCGCAGTCCCTTTTCGTTCTGTTCGTCCCACTGATCGCGGCCG CGTCCCTGATGCTTGGCAGTTTCTCGCGCTTCGGGGTGTGGAAGCAGATCCTGATCGCCGTGGCCCTTGTTCTGCCGATG CAGATCGTGCGCAATGCAAGCGAGGCAGCCGTGCGCGCCGATATCGAGGCCTGGCCCATGGCCTATGCGCAACCCGCGTC TGCGGCGGCCGTGGCGGCCATCATGGCCACGCTTGCCATGCGCCGTTCGACCCGGTGGAGGCGCGTTCCCGCATGA
Upstream 100 bases:
>100_bases TGGCCAGATCGCCCCTACGCAAGGGCTGAAAACGCTGATAAAACATAGATGACGCGGTCGGGCTGCCATCCGAACACCGC ATGTAGGGGATGTGTCTACC
Downstream 100 bases:
>100_bases TCCTGCACCTCTACATCGCGCGGCGCTTTCTTGTGTCCTTCGGGATCGTTCTGGCGGTTTTCATGGCCATTCTGTTGCCC ATCGACATGGCGGACCAATT
Product: permease YjgP/YjgQ
Products: NA
Alternate protein names: Permease YjgP/YjgQ; Permease; Permease YjgP/YjgQ Family; Permease Protein; Transporter YjgP/YjgQ; Permease Yjgp/Yjgq Family Protein; YjgP/YjgQ Permease; Permease YjgP
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MGQYDRYILRQLVALFGFFSLVLVSVYWVNQAARLFDRLIADGQNIGVFLEFSALTLPWIVQLILPVSAFVATLYIFNRM ISESELVVLQTAGLSALRLLRPVFVFGCLLAILLAVLVNILAPTARGQFTQRQAEVQDDLTGRFLRAGEFIHPAAGLTVY IREISELGEFRDLFLQDASTPGVEVTYTANTALLVRSDTGPRLVMFDGVAQTLDLDTGRLSTISFSDFTYSVGTLGGTGA RQIDVRELPTPLLLRANQQIAGALNLPLSHLVFEGHDRLAQSLFVLFVPLIAAASLMLGSFSRFGVWKQILIAVALVLPM QIVRNASEAAVRADIEAWPMAYAQPASAAAVAAIMATLAMRRSTRWRRVPA
Sequences:
>Translated_371_residues MGQYDRYILRQLVALFGFFSLVLVSVYWVNQAARLFDRLIADGQNIGVFLEFSALTLPWIVQLILPVSAFVATLYIFNRM ISESELVVLQTAGLSALRLLRPVFVFGCLLAILLAVLVNILAPTARGQFTQRQAEVQDDLTGRFLRAGEFIHPAAGLTVY IREISELGEFRDLFLQDASTPGVEVTYTANTALLVRSDTGPRLVMFDGVAQTLDLDTGRLSTISFSDFTYSVGTLGGTGA RQIDVRELPTPLLLRANQQIAGALNLPLSHLVFEGHDRLAQSLFVLFVPLIAAASLMLGSFSRFGVWKQILIAVALVLPM QIVRNASEAAVRADIEAWPMAYAQPASAAAVAAIMATLAMRRSTRWRRVPA >Mature_370_residues GQYDRYILRQLVALFGFFSLVLVSVYWVNQAARLFDRLIADGQNIGVFLEFSALTLPWIVQLILPVSAFVATLYIFNRMI SESELVVLQTAGLSALRLLRPVFVFGCLLAILLAVLVNILAPTARGQFTQRQAEVQDDLTGRFLRAGEFIHPAAGLTVYI REISELGEFRDLFLQDASTPGVEVTYTANTALLVRSDTGPRLVMFDGVAQTLDLDTGRLSTISFSDFTYSVGTLGGTGAR QIDVRELPTPLLLRANQQIAGALNLPLSHLVFEGHDRLAQSLFVLFVPLIAAASLMLGSFSRFGVWKQILIAVALVLPMQ IVRNASEAAVRADIEAWPMAYAQPASAAAVAAIMATLAMRRSTRWRRVPA
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40690; Mature: 40559
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQYDRYILRQLVALFGFFSLVLVSVYWVNQAARLFDRLIADGQNIGVFLEFSALTLPWI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHH VQLILPVSAFVATLYIFNRMISESELVVLQTAGLSALRLLRPVFVFGCLLAILLAVLVNI HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPTARGQFTQRQAEVQDDLTGRFLRAGEFIHPAAGLTVYIREISELGEFRDLFLQDAST HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC PGVEVTYTANTALLVRSDTGPRLVMFDGVAQTLDLDTGRLSTISFSDFTYSVGTLGGTGA CCEEEEEECCEEEEEECCCCCEEEEECCCHHHHCCCCCCEEEEEECCCEEECCCCCCCCC RQIDVRELPTPLLLRANQQIAGALNLPLSHLVFEGHDRLAQSLFVLFVPLIAAASLMLGS CEEEHHHCCCHHEEECCHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC FSRFGVWKQILIAVALVLPMQIVRNASEAAVRADIEAWPMAYAQPASAAAVAAIMATLAM CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHCCHHCCCCHHHHHHHHHHHHHH RRSTRWRRVPA HHCCCCCCCCC >Mature Secondary Structure GQYDRYILRQLVALFGFFSLVLVSVYWVNQAARLFDRLIADGQNIGVFLEFSALTLPWI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHH VQLILPVSAFVATLYIFNRMISESELVVLQTAGLSALRLLRPVFVFGCLLAILLAVLVNI HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPTARGQFTQRQAEVQDDLTGRFLRAGEFIHPAAGLTVYIREISELGEFRDLFLQDAST HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC PGVEVTYTANTALLVRSDTGPRLVMFDGVAQTLDLDTGRLSTISFSDFTYSVGTLGGTGA CCEEEEEECCEEEEEECCCCCEEEEECCCHHHHCCCCCCEEEEEECCCEEECCCCCCCCC RQIDVRELPTPLLLRANQQIAGALNLPLSHLVFEGHDRLAQSLFVLFVPLIAAASLMLGS CEEEHHHCCCHHEEECCHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC FSRFGVWKQILIAVALVLPMQIVRNASEAAVRADIEAWPMAYAQPASAAAVAAIMATLAM CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHCCHHCCCCHHHHHHHHHHHHHH RRSTRWRRVPA HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA