Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054270
Identifier: 89054270
GI number: 89054270
Start: 1767141
End: 1768472
Strand: Reverse
Name: 89054270
Synonym: Jann_1779
Alternate gene names: NA
Gene position: 1768472-1767141 (Counterclockwise)
Preceding gene: 89054272
Following gene: 89054268
Centisome position: 40.96
GC content: 61.64
Gene sequence:
>1332_bases ATGAACCAAGCCTATCGCCGCAATGTCCGCAAGATCGACCCCACCAAAGGCGTGATGCTGCCCGATGGCACGCTCAACGA CAATGACCGGATCGAGATCGGGCCCACGGCGCTGGCCTACGCGGAATGGGCCGCGGCGGGCCTGACCCTGCCCAACCTGC AAACCATGCGCGAGTATCGCCTTGGCCGCCTTGTGGGGCAATTGCAGGAACGCGACCTTGCGGGCGTGTTGATGACCGAC CCGCTCAACATCCGCTACGCCACCGATGCGACCAACATGCAGCTTTGGAACACCCACAACCCGTTCCGCGCCTGTCTGGT CTGCGCCGACGGGCATATGGTGCTGTGGGAATACAAGAACGCCCCTTTTCTGGCCGAGCATAATCCGCTGGTGCGCGAAA TCCGGTCCGGCGCGTCGATGTTCTACTTCACAGCCGGGGATCGCGGCGACGCGGTGGCGGAAACCTTCAGCGGTGAAGTG GCCGACCTGTTGCGCGAACATGCGGGCACGAACACCCGGCTCGCCGTCGACAAGATCATGCTCCACGGCGCGCGGGCGCT GGAGGCGCGGGGCCTGACGGTATCTGATGGGGAGTTGGTCACGGAACATGCCCGCAAGATCAAATGCGCCGATGAAATCC TCGCCATGCGCTGCGCGGTGGACGCCTGTGAAAAAAGCCTCAAGGCCATGGAGGACGCGATTGAACCGGGCAAATCCGAG GATGAAATCTGGGCCGTTCTGCACGCGGAAAACATCAAACGCGGCGGCGAATGGATTGAGACGCGGCTGTTTTCCTCTGG CCCCCGCACCAACCCGTGGTTTCAGGAATGCGGTCCCCGCACGCTTCTGCCCAATGAAATCAGTGCTTTGGATACGGACC TGATCGGCTGTTACGGCCTCTGCGTGGATATCTCCCGCACCTGGTGGACCGGCCCCGAAAAGCCGCGCCCCGATATGATC GAGGCGATGCAGCACGCCCATGAGCATATCATGGTCAATATGGACCGTCTGAAACCCGGCCGCTCCATCAATGATCTGGT CCATAACGGCCACAGGCTGGCCGACAAATACTGGGCGCGGAAATACTCCTGCCAGATGCACGGCGTGGGCCTCTGCGATG AATGGCCCCACGTGGGCTACCCCGACCATCACCATGACGATGCGTTCGACTACGTGCTGGAGCCCGGAATGATGCTGTGT GTGGAGGCGTTGGTGGGCGAAGAAGGCGGCGATTTCTGCATCAAGCTGGAAGATCAGGTGCTGATCACCGAAGACGGGTA CGAGAACCTGACGACCTATCCCTTCGATGCGGCGCTGATGGGGGCCTCCTAG
Upstream 100 bases:
>100_bases TGATCTTGTAGAACATGGTCCATTTCCGACCCTTTCGCGGCGCGATCTGACACGCGGAGGCGATCTGACCGCGCAAGGCT CATCCTAAGGGAGAGTGACC
Downstream 100 bases:
>100_bases ACGCCGGGTTCAGTGATCTCGAACATCCCCACAATCGCCCGGTGATCGGACCCCAATCTTGGGTGCACGGATTGGATGCC GCCCCGCCCCGGGAGGATCA
Product: peptidase M24
Products: NA
Alternate protein names: Proline Dipeptidase; Aminopeptidase; Peptidase; M24 Family Metallopeptidase; Xaa-Pro Aminopeptidase-Like Protein; CAAX Amino Terminal Protease Family Transmembrane; Xaa-Pro Dipeptidase; Xaa-Pro Aminopeptidase
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MNQAYRRNVRKIDPTKGVMLPDGTLNDNDRIEIGPTALAYAEWAAAGLTLPNLQTMREYRLGRLVGQLQERDLAGVLMTD PLNIRYATDATNMQLWNTHNPFRACLVCADGHMVLWEYKNAPFLAEHNPLVREIRSGASMFYFTAGDRGDAVAETFSGEV ADLLREHAGTNTRLAVDKIMLHGARALEARGLTVSDGELVTEHARKIKCADEILAMRCAVDACEKSLKAMEDAIEPGKSE DEIWAVLHAENIKRGGEWIETRLFSSGPRTNPWFQECGPRTLLPNEISALDTDLIGCYGLCVDISRTWWTGPEKPRPDMI EAMQHAHEHIMVNMDRLKPGRSINDLVHNGHRLADKYWARKYSCQMHGVGLCDEWPHVGYPDHHHDDAFDYVLEPGMMLC VEALVGEEGGDFCIKLEDQVLITEDGYENLTTYPFDAALMGAS
Sequences:
>Translated_443_residues MNQAYRRNVRKIDPTKGVMLPDGTLNDNDRIEIGPTALAYAEWAAAGLTLPNLQTMREYRLGRLVGQLQERDLAGVLMTD PLNIRYATDATNMQLWNTHNPFRACLVCADGHMVLWEYKNAPFLAEHNPLVREIRSGASMFYFTAGDRGDAVAETFSGEV ADLLREHAGTNTRLAVDKIMLHGARALEARGLTVSDGELVTEHARKIKCADEILAMRCAVDACEKSLKAMEDAIEPGKSE DEIWAVLHAENIKRGGEWIETRLFSSGPRTNPWFQECGPRTLLPNEISALDTDLIGCYGLCVDISRTWWTGPEKPRPDMI EAMQHAHEHIMVNMDRLKPGRSINDLVHNGHRLADKYWARKYSCQMHGVGLCDEWPHVGYPDHHHDDAFDYVLEPGMMLC VEALVGEEGGDFCIKLEDQVLITEDGYENLTTYPFDAALMGAS >Mature_443_residues MNQAYRRNVRKIDPTKGVMLPDGTLNDNDRIEIGPTALAYAEWAAAGLTLPNLQTMREYRLGRLVGQLQERDLAGVLMTD PLNIRYATDATNMQLWNTHNPFRACLVCADGHMVLWEYKNAPFLAEHNPLVREIRSGASMFYFTAGDRGDAVAETFSGEV ADLLREHAGTNTRLAVDKIMLHGARALEARGLTVSDGELVTEHARKIKCADEILAMRCAVDACEKSLKAMEDAIEPGKSE DEIWAVLHAENIKRGGEWIETRLFSSGPRTNPWFQECGPRTLLPNEISALDTDLIGCYGLCVDISRTWWTGPEKPRPDMI EAMQHAHEHIMVNMDRLKPGRSINDLVHNGHRLADKYWARKYSCQMHGVGLCDEWPHVGYPDHHHDDAFDYVLEPGMMLC VEALVGEEGGDFCIKLEDQVLITEDGYENLTTYPFDAALMGAS
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49668; Mature: 49668
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQAYRRNVRKIDPTKGVMLPDGTLNDNDRIEIGPTALAYAEWAAAGLTLPNLQTMREYR CCHHHHCCCCCCCCCCCEECCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCHHHHHHHH LGRLVGQLQERDLAGVLMTDPLNIRYATDATNMQLWNTHNPFRACLVCADGHMVLWEYKN HHHHHHHHHHCCCCCEEEECCCEEEEECCCCCEEEECCCCCCEEEEEEECCCEEEEEECC APFLAEHNPLVREIRSGASMFYFTAGDRGDAVAETFSGEVADLLREHAGTNTRLAVDKIM CCEEECCCHHHHHHHCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHCCCCCCHHHHHHH LHGARALEARGLTVSDGELVTEHARKIKCADEILAMRCAVDACEKSLKAMEDAIEPGKSE HHCCHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DEIWAVLHAENIKRGGEWIETRLFSSGPRTNPWFQECGPRTLLPNEISALDTDLIGCYGL CCEEEEEEHHHHHCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHH CVDISRTWWTGPEKPRPDMIEAMQHAHEHIMVNMDRLKPGRSINDLVHNGHRLADKYWAR EEECCHHCCCCCCCCCHHHHHHHHHHHHHEEEEHHHCCCCCCHHHHHHCCHHHHHHHHHH KYSCQMHGVGLCDEWPHVGYPDHHHDDAFDYVLEPGMMLCVEALVGEEGGDFCIKLEDQV HHCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECEE LITEDGYENLTTYPFDAALMGAS EEECCCCCCCCCCCCCCEECCCC >Mature Secondary Structure MNQAYRRNVRKIDPTKGVMLPDGTLNDNDRIEIGPTALAYAEWAAAGLTLPNLQTMREYR CCHHHHCCCCCCCCCCCEECCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCHHHHHHHH LGRLVGQLQERDLAGVLMTDPLNIRYATDATNMQLWNTHNPFRACLVCADGHMVLWEYKN HHHHHHHHHHCCCCCEEEECCCEEEEECCCCCEEEECCCCCCEEEEEEECCCEEEEEECC APFLAEHNPLVREIRSGASMFYFTAGDRGDAVAETFSGEVADLLREHAGTNTRLAVDKIM CCEEECCCHHHHHHHCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHCCCCCCHHHHHHH LHGARALEARGLTVSDGELVTEHARKIKCADEILAMRCAVDACEKSLKAMEDAIEPGKSE HHCCHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DEIWAVLHAENIKRGGEWIETRLFSSGPRTNPWFQECGPRTLLPNEISALDTDLIGCYGL CCEEEEEEHHHHHCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHH CVDISRTWWTGPEKPRPDMIEAMQHAHEHIMVNMDRLKPGRSINDLVHNGHRLADKYWAR EEECCHHCCCCCCCCCHHHHHHHHHHHHHEEEEHHHCCCCCCHHHHHHCCHHHHHHHHHH KYSCQMHGVGLCDEWPHVGYPDHHHDDAFDYVLEPGMMLCVEALVGEEGGDFCIKLEDQV HHCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECEE LITEDGYENLTTYPFDAALMGAS EEECCCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA