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The map label for this gene is yrbE [C]

Identifier: 89054229

GI number: 89054229

Start: 1730243

End: 1731025

Strand: Reverse

Name: yrbE [C]

Synonym: Jann_1738

Alternate gene names: 89054229

Gene position: 1731025-1730243 (Counterclockwise)

Preceding gene: 89054230

Following gene: 89054228

Centisome position: 40.09

GC content: 68.07

Gene sequence:

>783_bases
GTGACCCTGACCGCGCCCTTCGGCGCGCTTGGCCGCGCGACCCTCATCGCCCTGGCCACCATCGGCCAGATCGCCCTGTT
CGCGCTCGATGCCCTCCGCCACCTCGCCACACCGCCCTTCTACATCCGCGAGACCGCGCGGCAGTTTCTCACCATCGGCT
GGCTCAGCCTCCCCGTCGTCGGCCTCACGGCGTTTTTCACTGGTGGCGCGCTGGCACTTCAGATCTACGCCGGCGGCGCG
CGGTTCAATGCGGAAGCCGTGGTCCCCCAGATCGTCGCCATCAGCATCGCGCGGGAGCTTGGGCCGGTCCTTGGCGGCCT
CATGGTCGCCGGTCGCGTGGCCGCGGCCATTGCCGCCGAGATCGCCACGATGAAAGTGACCGAGCAGATCGACGCCCTGC
GCACGCTGTCCACTCACCCGATGAAGTACCTCACCGCGCCGCGCCTGATCGCGGCGACGCTCTCCCTGCCGGTGCTGGTG
GCCGTCGGCGACAGTATCGGCATCTTCGGCGGCTACCTGGTCTCCACCTCCCGGCTGGACTTCAACCCGGCAGCGTACCT
GTCCAACACCCGTGACTTCCTGACCATCCGGGACGTCACGTCGGGCTTGGTCAAGGGGGCCGTCTTCGGCTTCATCGTGG
CACTCATGGGCTGCTACCACGGCATGAACTCGGGCCGTGGCGCGCGCGGCGTCGGGCGCGCCACCACGCAGGCCGTCGTC
TCCGCCTCGATCCTGATTCTCGCGGCCAATTATCTCCTGACAGAGGCGTTCTTTTCCGCATGA

Upstream 100 bases:

>100_bases
GGCCCCATCAGACCATCGATCAACTGGCCGAGGCGGCGGGCACCATCGGCTATGAAATCCTCACCTCCCTGGGCCCTCGC
TACCGGCGCGCGTTAACCCC

Downstream 100 bases:

>100_bases
CCCGCCCCCTTTCCCCGTTCTTCAAATATCCCGGGGGTGTGGGGGCTGGCCCCCACGGTGTCGCGGATGTGGGAGCCGGC
CCCCACGGGCGCGATGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MTLTAPFGALGRATLIALATIGQIALFALDALRHLATPPFYIRETARQFLTIGWLSLPVVGLTAFFTGGALALQIYAGGA
RFNAEAVVPQIVAISIARELGPVLGGLMVAGRVAAAIAAEIATMKVTEQIDALRTLSTHPMKYLTAPRLIAATLSLPVLV
AVGDSIGIFGGYLVSTSRLDFNPAAYLSNTRDFLTIRDVTSGLVKGAVFGFIVALMGCYHGMNSGRGARGVGRATTQAVV
SASILILAANYLLTEAFFSA

Sequences:

>Translated_260_residues
MTLTAPFGALGRATLIALATIGQIALFALDALRHLATPPFYIRETARQFLTIGWLSLPVVGLTAFFTGGALALQIYAGGA
RFNAEAVVPQIVAISIARELGPVLGGLMVAGRVAAAIAAEIATMKVTEQIDALRTLSTHPMKYLTAPRLIAATLSLPVLV
AVGDSIGIFGGYLVSTSRLDFNPAAYLSNTRDFLTIRDVTSGLVKGAVFGFIVALMGCYHGMNSGRGARGVGRATTQAVV
SASILILAANYLLTEAFFSA
>Mature_259_residues
TLTAPFGALGRATLIALATIGQIALFALDALRHLATPPFYIRETARQFLTIGWLSLPVVGLTAFFTGGALALQIYAGGAR
FNAEAVVPQIVAISIARELGPVLGGLMVAGRVAAAIAAEIATMKVTEQIDALRTLSTHPMKYLTAPRLIAATLSLPVLVA
VGDSIGIFGGYLVSTSRLDFNPAAYLSNTRDFLTIRDVTSGLVKGAVFGFIVALMGCYHGMNSGRGARGVGRATTQAVVS
ASILILAANYLLTEAFFSA

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=255, Percent_Identity=32.156862745098, Blast_Score=130, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 27088; Mature: 26957

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTAPFGALGRATLIALATIGQIALFALDALRHLATPPFYIRETARQFLTIGWLSLPVV
CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
GLTAFFTGGALALQIYAGGARFNAEAVVPQIVAISIARELGPVLGGLMVAGRVAAAIAAE
HHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IATMKVTEQIDALRTLSTHPMKYLTAPRLIAATLSLPVLVAVGDSIGIFGGYLVSTSRLD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHEEECCCC
FNPAAYLSNTRDFLTIRDVTSGLVKGAVFGFIVALMGCYHGMNSGRGARGVGRATTQAVV
CCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
SASILILAANYLLTEAFFSA
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLTAPFGALGRATLIALATIGQIALFALDALRHLATPPFYIRETARQFLTIGWLSLPVV
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
GLTAFFTGGALALQIYAGGARFNAEAVVPQIVAISIARELGPVLGGLMVAGRVAAAIAAE
HHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IATMKVTEQIDALRTLSTHPMKYLTAPRLIAATLSLPVLVAVGDSIGIFGGYLVSTSRLD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHEEECCCC
FNPAAYLSNTRDFLTIRDVTSGLVKGAVFGFIVALMGCYHGMNSGRGARGVGRATTQAVV
CCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
SASILILAANYLLTEAFFSA
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA