Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053859
Identifier: 89053859
GI number: 89053859
Start: 1335546
End: 1336808
Strand: Direct
Name: 89053859
Synonym: Jann_1368
Alternate gene names: NA
Gene position: 1335546-1336808 (Clockwise)
Preceding gene: 89053858
Following gene: 89053860
Centisome position: 30.93
GC content: 62.31
Gene sequence:
>1263_bases ATGACACGAACGATCCTTACGACAACAGCTTTGGCAAGCTTCCTGGCCGGACCGGCCCTGGCCCAGGATGCCGCTGACGT CCTGAACACCTACGCCGACATTGCGGCGGCGGGCTACGAGGATAGCCTGATCACGGCCCAGGCCCTTGAGCGCGCCGTAG ATGCGCTGATTGCCGAGCCGTCTGCGCAAACGCTGACCGCTGCCCGCACGGCTTGGCTCCAGGCCCGCGTGCCCTATCAA CAAACGGAGGTGTTCCGCTTCGGCAATGCCATCGTCGATGATTGGGAAGGTCGCGTGAATGCCTGGCCCTTGGATGAGGG TCTGATCGACTATGTGGACGGTGCCTATGGCGGTCCCACCGATGAGAACACGCTCGCCGCGGTGAACGTGATCGCCAATC CAACCTTCACGCTCTCGGGCTCCGAGGTTGATGCGTCGTCGATCACGCCCGCACTCCTCGAAGACACGCTGCACGAAGCT GATGGGGTGGAGGCTAATGTCGCCACCGGCTATCACGCCGTGGAATTCCTGCTCTGGGGCCAGGACCTGAACGGCCACGG CGATGGCGCAGGGAACCGGCCCTACACCGATTATGCCGCTGGCGATGACTGTACGGGCGGCAATTGTGATCGCCGGGCCG AATACCTGGCGGCGGCGACCGAGCTTTTGGTGTCTGACCTCGAATGGATGGCCGCGCAGTGGACCGCTGATGGGGACGCC CGAGCGGCCCTGATGGAGAATGAGCAGGCGGGCCTATCTGCGATGCTGACCGGCATGGGCAGCCTCAGCTATGGCGAGAC GGCAGGGGAGCGGATGCGCCTTGGCTTGATGTTGAATGACCCGGAGGAGGAGCATTCCTGCTTCGCCGACAACACCCACA ACGACCATTTCTTCAACGGTGTGGGCGTGCGCAATGTCTATCTGGGCAGCTATTCCCGGATCGATGGCACGCTTGTTTCT GGCCCGTCCCTCTCGGATCTCGTGATGGATGTAGATGCTGATCTGGATGCAGAGATGCGGTCGCGTCTGGCCGAGGCCGT TCTGGCCCTGGGTGAGATCAAGACCGCAGCGGAGGCGGGCTTTGCCTATGACGAGATGCTTGAGCGCGGTAATGAAGGTG GTGAGCTGCTCATCATGGGTGGCGTCAACGGCCTGATCGAGCAGACCCGTTCGATCGAGCGGGTTGTGACGGCGCTTGGC CTGGATGGAATCGAATTTGAAGGCTCCGACAGCCTCGACAACCCCTCCGCCGTTTTCCAGTGA
Upstream 100 bases:
>100_bases CATTATTTGAGCTTCTCATTGATCCGATCACTTCGACCCAGCCAGTGCCCGTGCCCAAGCCAGTCGACCCGAATGACCGC ACAAAAAGGGACACTGCGCG
Downstream 100 bases:
>100_bases GACAATCTGAAGGGGTGCGGTCCGCCGCGCCCCTCCGCCAGAGATGACCAATGACACCGCGCATGTTTTTTGCCGCCCCA ATCGCGGCGGCCTTTCTCCT
Product: putative lipoprotein
Products: NA
Alternate protein names: Iron-Regulated Protein A; Insulin-Cleaving Metalloproteinase Outer Membrane Protein; Peptidase; Imelysin; Lipoprotein; Peptidase Imelysin Family; Insulin-Cleaving Metalloproteinase Outer Membrane; Iron-Regulated Lipoprotein; Imelysin Family; Exported Protein
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MTRTILTTTALASFLAGPALAQDAADVLNTYADIAAAGYEDSLITAQALERAVDALIAEPSAQTLTAARTAWLQARVPYQ QTEVFRFGNAIVDDWEGRVNAWPLDEGLIDYVDGAYGGPTDENTLAAVNVIANPTFTLSGSEVDASSITPALLEDTLHEA DGVEANVATGYHAVEFLLWGQDLNGHGDGAGNRPYTDYAAGDDCTGGNCDRRAEYLAAATELLVSDLEWMAAQWTADGDA RAALMENEQAGLSAMLTGMGSLSYGETAGERMRLGLMLNDPEEEHSCFADNTHNDHFFNGVGVRNVYLGSYSRIDGTLVS GPSLSDLVMDVDADLDAEMRSRLAEAVLALGEIKTAAEAGFAYDEMLERGNEGGELLIMGGVNGLIEQTRSIERVVTALG LDGIEFEGSDSLDNPSAVFQ
Sequences:
>Translated_420_residues MTRTILTTTALASFLAGPALAQDAADVLNTYADIAAAGYEDSLITAQALERAVDALIAEPSAQTLTAARTAWLQARVPYQ QTEVFRFGNAIVDDWEGRVNAWPLDEGLIDYVDGAYGGPTDENTLAAVNVIANPTFTLSGSEVDASSITPALLEDTLHEA DGVEANVATGYHAVEFLLWGQDLNGHGDGAGNRPYTDYAAGDDCTGGNCDRRAEYLAAATELLVSDLEWMAAQWTADGDA RAALMENEQAGLSAMLTGMGSLSYGETAGERMRLGLMLNDPEEEHSCFADNTHNDHFFNGVGVRNVYLGSYSRIDGTLVS GPSLSDLVMDVDADLDAEMRSRLAEAVLALGEIKTAAEAGFAYDEMLERGNEGGELLIMGGVNGLIEQTRSIERVVTALG LDGIEFEGSDSLDNPSAVFQ >Mature_419_residues TRTILTTTALASFLAGPALAQDAADVLNTYADIAAAGYEDSLITAQALERAVDALIAEPSAQTLTAARTAWLQARVPYQQ TEVFRFGNAIVDDWEGRVNAWPLDEGLIDYVDGAYGGPTDENTLAAVNVIANPTFTLSGSEVDASSITPALLEDTLHEAD GVEANVATGYHAVEFLLWGQDLNGHGDGAGNRPYTDYAAGDDCTGGNCDRRAEYLAAATELLVSDLEWMAAQWTADGDAR AALMENEQAGLSAMLTGMGSLSYGETAGERMRLGLMLNDPEEEHSCFADNTHNDHFFNGVGVRNVYLGSYSRIDGTLVSG PSLSDLVMDVDADLDAEMRSRLAEAVLALGEIKTAAEAGFAYDEMLERGNEGGELLIMGGVNGLIEQTRSIERVVTALGL DGIEFEGSDSLDNPSAVFQ
Specific function: Unknown
COG id: COG3487
COG function: function code P; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44573; Mature: 44442
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTILTTTALASFLAGPALAQDAADVLNTYADIAAAGYEDSLITAQALERAVDALIAEP CCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC SAQTLTAARTAWLQARVPYQQTEVFRFGNAIVDDWEGRVNAWPLDEGLIDYVDGAYGGPT CHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCC DENTLAAVNVIANPTFTLSGSEVDASSITPALLEDTLHEADGVEANVATGYHAVEFLLWG CCCCEEEEEEECCCEEEECCCCCCHHHCCHHHHHHHHHHHCCCCEECCCCHHEEEEEEEC QDLNGHGDGAGNRPYTDYAAGDDCTGGNCDRRAEYLAAATELLVSDLEWMAAQWTADGDA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RAALMENEQAGLSAMLTGMGSLSYGETAGERMRLGLMLNDPEEEHSCFADNTHNDHFFNG HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCCCC VGVRNVYLGSYSRIDGTLVSGPSLSDLVMDVDADLDAEMRSRLAEAVLALGEIKTAAEAG CCCEEEEECCCCCCCCEEECCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC FAYDEMLERGNEGGELLIMGGVNGLIEQTRSIERVVTALGLDGIEFEGSDSLDNPSAVFQ CHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHCC >Mature Secondary Structure TRTILTTTALASFLAGPALAQDAADVLNTYADIAAAGYEDSLITAQALERAVDALIAEP CCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC SAQTLTAARTAWLQARVPYQQTEVFRFGNAIVDDWEGRVNAWPLDEGLIDYVDGAYGGPT CHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCC DENTLAAVNVIANPTFTLSGSEVDASSITPALLEDTLHEADGVEANVATGYHAVEFLLWG CCCCEEEEEEECCCEEEECCCCCCHHHCCHHHHHHHHHHHCCCCEECCCCHHEEEEEEEC QDLNGHGDGAGNRPYTDYAAGDDCTGGNCDRRAEYLAAATELLVSDLEWMAAQWTADGDA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RAALMENEQAGLSAMLTGMGSLSYGETAGERMRLGLMLNDPEEEHSCFADNTHNDHFFNG HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCCCC VGVRNVYLGSYSRIDGTLVSGPSLSDLVMDVDADLDAEMRSRLAEAVLALGEIKTAAEAG CCCEEEEECCCCCCCCEEECCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC FAYDEMLERGNEGGELLIMGGVNGLIEQTRSIERVVTALGLDGIEFEGSDSLDNPSAVFQ CHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA