Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
---|---|
Accession | NC_007802 |
Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89053839
Identifier: 89053839
GI number: 89053839
Start: 1313247
End: 1313537
Strand: Direct
Name: 89053839
Synonym: Jann_1348
Alternate gene names: NA
Gene position: 1313247-1313537 (Clockwise)
Preceding gene: 89053837
Following gene: 89053840
Centisome position: 30.41
GC content: 53.95
Gene sequence:
>291_bases TTGCATTTTAAAATTGTAACAGCTTACATTGGCGAACAGGATTCGTATGTCGGGAGGGACAGACGAGCTATGGCTTTCTT GGCAGCGGCTATTTTACTGGCGGCCTTCATCGGTAACGTCATCTTGGGAGCGTCATCCAACTCGGCCATCCTTGGCAATG TGGGGGAGATGTTGCTTCTGCTGTCGGCGTCGATTTTGTTCGTCATCGGGATCCTGAAAAAAGAAGCAGACGCCAAGGCA GAGGCCGCAGCAGCCCAAGCCCGCGTCGACGACGTCCAGGGAGGACACTGA
Upstream 100 bases:
>100_bases GACTGTCGTTCATCTGGGCTCAACCTGGGGGTGAAAGCATGGATGGCATGACAATCGGCCAAAACCGCCACGGTTCCAAT GCTACACGAAATGTAAGCGC
Downstream 100 bases:
>100_bases TTTGGATCACGACACTCAAGAGCTGAAGTCGGCAGAGCGCCGCAATTTCCTGAAGCTGACCGGCGCAGGTGCATTCACCG CCGCCATGGTCGCCGGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MHFKIVTAYIGEQDSYVGRDRRAMAFLAAAILLAAFIGNVILGASSNSAILGNVGEMLLLLSASILFVIGILKKEADAKA EAAAAQARVDDVQGGH
Sequences:
>Translated_96_residues MHFKIVTAYIGEQDSYVGRDRRAMAFLAAAILLAAFIGNVILGASSNSAILGNVGEMLLLLSASILFVIGILKKEADAKA EAAAAQARVDDVQGGH >Mature_96_residues MHFKIVTAYIGEQDSYVGRDRRAMAFLAAAILLAAFIGNVILGASSNSAILGNVGEMLLLLSASILFVIGILKKEADAKA EAAAAQARVDDVQGGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10002; Mature: 10002
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFKIVTAYIGEQDSYVGRDRRAMAFLAAAILLAAFIGNVILGASSNSAILGNVGEMLLL CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LSASILFVIGILKKEADAKAEAAAAQARVDDVQGGH HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MHFKIVTAYIGEQDSYVGRDRRAMAFLAAAILLAAFIGNVILGASSNSAILGNVGEMLLL CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LSASILFVIGILKKEADAKAEAAAAQARVDDVQGGH HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA