Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053624
Identifier: 89053624
GI number: 89053624
Start: 1095453
End: 1096040
Strand: Direct
Name: 89053624
Synonym: Jann_1133
Alternate gene names: NA
Gene position: 1095453-1096040 (Clockwise)
Preceding gene: 89053610
Following gene: 89053630
Centisome position: 25.37
GC content: 59.69
Gene sequence:
>588_bases ATGCGTAAGACCCTTTCAGCCGCATGCGTTGCGACCCTTCTCGGCACCGTCGCTGCCCATGCCGCCCCCGTCACATTGAC CCAATCCGGGACGTTGACATCCAACGGACAGGATTTCATTTTTGATTTTCTGGCGCTGCCAACCGTCGTCTCTTCGGCAT CGGTAACCATTGCGTCCAGCATTTCGGGGGGCACCGAAGGCTTGGACCTGAGCGGTTCGTTCAGCCGCGAAAATGAGTTC TTCTCGTTGACCTTTGATGGCGCTGCGGGCGGGTCCTTCAGCTGTGGGGGACCGTCCAGCAACGGATCGACCGCGATCCC CGGCGCGACAGACAATTCCCGCGCCTTCAATGATTGTGTGTTCTCGCTCGATGTCGTTTTGACGGACCTGAGCGTCTTTG CCGATGGCGCGTTTTCACTGGGCGTGAACTTTGGCAATGATGTGAGTACATTCAACCAGAACGACCAGTTTACGGCGACC TTGACCTACGACAATGTTGCCGCTGTTCCGCTGCCTGCCTCCGTCGGCTTCATGCTGCTGGGTCTGGCGGGTCTGGGCAC CGTGGCTGCGCGCCGCCGTCGCGGCTGA
Upstream 100 bases:
>100_bases CAGGCGGATTTGTTGACATAAAATTGACCGAAAGTCAGAGGTACAAATAAAGTCTCGGCGTTTTCCTGCGCCTTGAGATT GCATTATCCGGAGTACCAAT
Downstream 100 bases:
>100_bases TCTGAAAGACCACTGTAGAAATTCCAAGACGCTCGGTCCCATGGGCCGGGCGTTTTTTGTGGTCGTGCCGTTTGGACTGA AATGTCGCGTCAGGCCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MRKTLSAACVATLLGTVAAHAAPVTLTQSGTLTSNGQDFIFDFLALPTVVSSASVTIASSISGGTEGLDLSGSFSRENEF FSLTFDGAAGGSFSCGGPSSNGSTAIPGATDNSRAFNDCVFSLDVVLTDLSVFADGAFSLGVNFGNDVSTFNQNDQFTAT LTYDNVAAVPLPASVGFMLLGLAGLGTVAARRRRG
Sequences:
>Translated_195_residues MRKTLSAACVATLLGTVAAHAAPVTLTQSGTLTSNGQDFIFDFLALPTVVSSASVTIASSISGGTEGLDLSGSFSRENEF FSLTFDGAAGGSFSCGGPSSNGSTAIPGATDNSRAFNDCVFSLDVVLTDLSVFADGAFSLGVNFGNDVSTFNQNDQFTAT LTYDNVAAVPLPASVGFMLLGLAGLGTVAARRRRG >Mature_195_residues MRKTLSAACVATLLGTVAAHAAPVTLTQSGTLTSNGQDFIFDFLALPTVVSSASVTIASSISGGTEGLDLSGSFSRENEF FSLTFDGAAGGSFSCGGPSSNGSTAIPGATDNSRAFNDCVFSLDVVLTDLSVFADGAFSLGVNFGNDVSTFNQNDQFTAT LTYDNVAAVPLPASVGFMLLGLAGLGTVAARRRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19745; Mature: 19745
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTLSAACVATLLGTVAAHAAPVTLTQSGTLTSNGQDFIFDFLALPTVVSSASVTIASS CCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC ISGGTEGLDLSGSFSRENEFFSLTFDGAAGGSFSCGGPSSNGSTAIPGATDNSRAFNDCV CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHH FSLDVVLTDLSVFADGAFSLGVNFGNDVSTFNQNDQFTATLTYDNVAAVPLPASVGFMLL HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCEEECCCCHHHHHHHH GLAGLGTVAARRRRG HHHHHHHHHHHHCCC >Mature Secondary Structure MRKTLSAACVATLLGTVAAHAAPVTLTQSGTLTSNGQDFIFDFLALPTVVSSASVTIASS CCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC ISGGTEGLDLSGSFSRENEFFSLTFDGAAGGSFSCGGPSSNGSTAIPGATDNSRAFNDCV CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHH FSLDVVLTDLSVFADGAFSLGVNFGNDVSTFNQNDQFTATLTYDNVAAVPLPASVGFMLL HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCEEECCCCHHHHHHHH GLAGLGTVAARRRRG HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA