Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053590
Identifier: 89053590
GI number: 89053590
Start: 1060480
End: 1061223
Strand: Direct
Name: 89053590
Synonym: Jann_1099
Alternate gene names: NA
Gene position: 1060480-1061223 (Clockwise)
Preceding gene: 89053587
Following gene: 89053593
Centisome position: 24.56
GC content: 64.11
Gene sequence:
>744_bases ATGATTAAGACATTTGCCGACGCCGCCGCATCCGTCGGGAAGGCGGTTCTGTTGCTTGCCCTGCCCGTTTATCTGGCCGT TGATACGGCGCGCTACACCGTGAGCGAAAGCTACCGGGAGAAACGGTTGGCGCAGCAGGATGCGCTTTGCTTTGATCTGT TCGACGAGGAGACGGGTCTTGGGGACCCCGTGGCCGAGGCCGCCCGTCAAGAGGCGTTGCCCCTGTCGCTTCTGGGCAAG CTGGACCTGTTTCTGCAATGTGCCACGATCACCGAGATCGGGCTGGCCGGGATCAAACTGCAACAGGCCGAGCAGCAGCG GGTGGCCCAGTTGACGCAGGCCCATGCGGAAGGCGTTGAAGAAATCGCCGCCGAGGCGCGGGTGCTGGCGGAGGAGGCTT ACGCGCGCGGCTGGGTCAGCGCGATGGCGGCGGAGGCCGATGGCAATGATACGGGCGCGGTCTGGCAGGGGTTCAATAAC GGGGCCGGGATCGACTGGACCCCGATTATCCAGAACGGATCTGGCAATGCGTTGGGCGATGATCAGATCGTGATCGTGCC GCCTGATCCGGTGGTGGAGCCTGGCATTGGAGAAGTGGATCCGGTGATCGTGGAAGAGGCACCCCTGACGATCCCGCTGC CCGATGACCAGCGCGAGGCCCTGGAGGCCGCATTGGACGCGGCGGTGCGTGATGCGCTGCAATCCTACCGACCGGACCCG ATCACGGGCCGCGATCTTCAATGA
Upstream 100 bases:
>100_bases GCCCAGATGAAAGGGGGAGCGGCGTGCCCCAACTTCTGACTTTGCCGATTTTCTGCTATTGTTTCGCCATTGCAGACAAT CCCATTTCAAAAGGTGCCCC
Downstream 100 bases:
>100_bases TGCGCGGGGTCGGATGCGCCCGCGCGTCACCGTTGTCTGCGGGCGTCAGCCTGCCATGAAGGCCGAGACGCCGAGGATCA TGATGCAGACCCAGCCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MIKTFADAAASVGKAVLLLALPVYLAVDTARYTVSESYREKRLAQQDALCFDLFDEETGLGDPVAEAARQEALPLSLLGK LDLFLQCATITEIGLAGIKLQQAEQQRVAQLTQAHAEGVEEIAAEARVLAEEAYARGWVSAMAAEADGNDTGAVWQGFNN GAGIDWTPIIQNGSGNALGDDQIVIVPPDPVVEPGIGEVDPVIVEEAPLTIPLPDDQREALEAALDAAVRDALQSYRPDP ITGRDLQ
Sequences:
>Translated_247_residues MIKTFADAAASVGKAVLLLALPVYLAVDTARYTVSESYREKRLAQQDALCFDLFDEETGLGDPVAEAARQEALPLSLLGK LDLFLQCATITEIGLAGIKLQQAEQQRVAQLTQAHAEGVEEIAAEARVLAEEAYARGWVSAMAAEADGNDTGAVWQGFNN GAGIDWTPIIQNGSGNALGDDQIVIVPPDPVVEPGIGEVDPVIVEEAPLTIPLPDDQREALEAALDAAVRDALQSYRPDP ITGRDLQ >Mature_247_residues MIKTFADAAASVGKAVLLLALPVYLAVDTARYTVSESYREKRLAQQDALCFDLFDEETGLGDPVAEAARQEALPLSLLGK LDLFLQCATITEIGLAGIKLQQAEQQRVAQLTQAHAEGVEEIAAEARVLAEEAYARGWVSAMAAEADGNDTGAVWQGFNN GAGIDWTPIIQNGSGNALGDDQIVIVPPDPVVEPGIGEVDPVIVEEAPLTIPLPDDQREALEAALDAAVRDALQSYRPDP ITGRDLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26259; Mature: 26259
Theoretical pI: Translated: 3.87; Mature: 3.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTFADAAASVGKAVLLLALPVYLAVDTARYTVSESYREKRLAQQDALCFDLFDEETGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GDPVAEAARQEALPLSLLGKLDLFLQCATITEIGLAGIKLQQAEQQRVAQLTQAHAEGVE CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH EIAAEARVLAEEAYARGWVSAMAAEADGNDTGAVWQGFNNGAGIDWTPIIQNGSGNALGD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCCC DQIVIVPPDPVVEPGIGEVDPVIVEEAPLTIPLPDDQREALEAALDAAVRDALQSYRPDP CCEEEECCCCCCCCCCCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCC ITGRDLQ CCCCCCC >Mature Secondary Structure MIKTFADAAASVGKAVLLLALPVYLAVDTARYTVSESYREKRLAQQDALCFDLFDEETGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GDPVAEAARQEALPLSLLGKLDLFLQCATITEIGLAGIKLQQAEQQRVAQLTQAHAEGVE CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH EIAAEARVLAEEAYARGWVSAMAAEADGNDTGAVWQGFNNGAGIDWTPIIQNGSGNALGD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCCC DQIVIVPPDPVVEPGIGEVDPVIVEEAPLTIPLPDDQREALEAALDAAVRDALQSYRPDP CCEEEECCCCCCCCCCCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCC ITGRDLQ CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA