Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053503
Identifier: 89053503
GI number: 89053503
Start: 966497
End: 966898
Strand: Direct
Name: 89053503
Synonym: Jann_1012
Alternate gene names: NA
Gene position: 966497-966898 (Clockwise)
Preceding gene: 89053493
Following gene: 89053504
Centisome position: 22.38
GC content: 66.67
Gene sequence:
>402_bases GTGGAGAGTGTAAAGTGCGGGCGCGGCGAGGTGGTCATACGCCACGCGCGTCAGAGCGCCGATCACGGGCAGGCGGACAC TGCGCGCCAGCCAGCGCATTCGCGGCAGATGATCCCAGATCGCGGCAAACGCGTCGATGCCGGACACGTGACGCCCATCG GGCAGGCGCGCGTGGAGGCGGCGCTTGGCCTGATCCGGCGTCAGGTCCCATTGCGCAAGTGGCGCGGCGTGGAGATCTTC AAACACGAGAGGCGCGCCGAGTGCGTCGGCATAGCGGGCATATTGGGCAATCTCCGCCCGGCAGATCGGGCAGCGATCGT TGTAGAGGACATGGGTCACTTGCATCGCCGTGAGATAGGGCACATGTGGCGGTTGCCCATGGTCCCGTCCACGGGCACGT GA
Upstream 100 bases:
>100_bases CCACGAGGGTCACAATGGTGGCGTCAAACTCATGCTCGATGGTAAACATGGGGCGAGGTTAGGGGTGTGGATTGGCGTTG CCAAGCCTCTCTCTGCGCTT
Downstream 100 bases:
>100_bases AGGACGCGCTCTGGACGCCCGGTCTGGCCGCGTTAGAGTTGGCCAAGTTGACCGGAGGCTCCGCATGCGCGCGCTCATAC TTCTTATGTCTGTCCTGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MESVKCGRGEVVIRHARQSADHGQADTARQPAHSRQMIPDRGKRVDAGHVTPIGQARVEAALGLIRRQVPLRKWRGVEIF KHERRAECVGIAGILGNLRPADRAAIVVEDMGHLHRREIGHMWRLPMVPSTGT
Sequences:
>Translated_133_residues MESVKCGRGEVVIRHARQSADHGQADTARQPAHSRQMIPDRGKRVDAGHVTPIGQARVEAALGLIRRQVPLRKWRGVEIF KHERRAECVGIAGILGNLRPADRAAIVVEDMGHLHRREIGHMWRLPMVPSTGT >Mature_133_residues MESVKCGRGEVVIRHARQSADHGQADTARQPAHSRQMIPDRGKRVDAGHVTPIGQARVEAALGLIRRQVPLRKWRGVEIF KHERRAECVGIAGILGNLRPADRAAIVVEDMGHLHRREIGHMWRLPMVPSTGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14810; Mature: 14810
Theoretical pI: Translated: 11.68; Mature: 11.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESVKCGRGEVVIRHARQSADHGQADTARQPAHSRQMIPDRGKRVDAGHVTPIGQARVEA CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHH ALGLIRRQVPLRKWRGVEIFKHERRAECVGIAGILGNLRPADRAAIVVEDMGHLHRREIG HHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHH HMWRLPMVPSTGT HEECCCCCCCCCC >Mature Secondary Structure MESVKCGRGEVVIRHARQSADHGQADTARQPAHSRQMIPDRGKRVDAGHVTPIGQARVEA CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHH ALGLIRRQVPLRKWRGVEIFKHERRAECVGIAGILGNLRPADRAAIVVEDMGHLHRREIG HHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHH HMWRLPMVPSTGT HEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA