Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is fhs
Identifier: 89053472
GI number: 89053472
Start: 937552
End: 939228
Strand: Direct
Name: fhs
Synonym: Jann_0981
Alternate gene names: 89053472
Gene position: 937552-939228 (Clockwise)
Preceding gene: 89053470
Following gene: 89053473
Centisome position: 21.71
GC content: 62.67
Gene sequence:
>1677_bases ATGGGCTACAAATCAGACATCGAGATCGCGCGTGAGGCGGTGAAGCGGCCGATCCAGGAGATCGGGGCGAAGATCGGGAT CGAGAGCGCGGACTTGCTGCCCTACGGTCACGACAAGGCGAAGGTGAGCCAATCGTTCATCAATTCGGTGCAGAATCGGG ATAACGGCCACCTGATTCTGGTGACCGCGATCAATCCGACGCCTGCGGGCGAAGGTAAGACGACGACCACGGTGGGTCTG GGCGACGGCCTGAACCGCATCGGCAAGAACGCGATGGTTTGTATCCGGGAGGCCTCCTTGGGGCCGAACTTCGGGATGAA AGGTGGCGCGGCGGGCGGCGGTTACGCGCAGGTTGTGCCGATGGAGGAGATGAACCTCCACTTCACCGGTGATTTCCACG CCATCACCTCGGCCCACTCGCTCCTGTCGGCGATGATCGACAACCACATCTACTGGGGTAATGAGCTGGAGATCGACGTG CGCCGGGTTGTCTGGCGGCGCGTGGTGGACATGAACGACCGCGCTTTGCGGCAGATCACGGCGTCGCTCGGCGGCGTGGC CAACGGCTTCCCGCGGGAGGCGGGATTTGACATCACCGTGGCCTCCGAGGTCATGGCGATCCTGTGCCTCGCGAAGGACC TCAAGGACCTGCAAGAGCGTCTTGGCGCGATGATCGTCGCCTACCGTCGCGACCGGTCGCCCGTTTTCGCGCGGGATATC AAGGCCGATGGCGCGATGACGGTACTGTTGAAGGACGCGATGCAGCCCAACATCGTGCAGACGCTGGAGAACAACCCGGC GTTCGTGCACGGCGGCCCGTTTGCCAACATCGCCCACGGCTGTAACTCTGTCATCGCCACGACCACAGCGTTGAAGCTGT GCGACTATGTGGTGACGGAAGCGGGCTTTGGCGCGGATCTGGGGGCGGAGAAGTTCCTCAACATCAAGTGCCGCAAGGCG GGTCTTGCGCCCTCGGTCGTGGTTGTTGTGGCCACAGTGCGGGCGATGAAGATGAACGGCGGGGTCGCGAAAGCGGATTT GGGCGCGGAAAATGTGGATGCGGTCCAGAACGGTTGCGCCAACCTCGGTCGTCACATCGAGAACGTCAAATCCTTCGGCG TGCCGGTCGTCGTGGCCATTAACCACTTTGTGACGGATACCGACGCAGAAGTGCAGGCGGTGAAGGATTATGTGGCGTCG CAAGGGGCCGAGGCTGTCCTCAGCCGTCACTGGGAGTTGGGCAGCGAGGGCTCTGCGCCGCTGGCCGAGAAGGTCGTGGA GGTGATCGAAAAGGGCGAGGCCAACTTCCAGACGCTCTACCCCGACGACATGCCGCTGGCCGAGAAAATCCAGGCGGTCT GCAAGGGCATCTACCGCGCGGATGAGGCGGTGATGGACAAGAAGATCCTCGATCAACTGAAGCTGTGGGAGGATCAGGGA TACGGTAAACTACCGGTTTGCATGGCAAAAACCCAGTACTCCTTCACCACGGACCCCAATGAGCGCGGCGCGCCCACCGG CTTCACCATCCCCGTGCGCGAAGTGCGGCTGAGCGCGGGCGCGGGCTTCATCGTGGCCGTCTGCGGCGAGATCATGACCA TGCCCGGCCTGCCCCGCAAACCGTCGGCAGAGGCCATCCACCTCAACGACGACGGCCAGATCGAAGGCTTGTTCTGA
Upstream 100 bases:
>100_bases GGATGCCCTGCGAAAATGTCGGAATTGGCACTATCTCCCGCTGGGATGCCCGGTAAGGCTGCGTATACAAACGTATTCAC GCGACCGGGGAGAGCGCGCC
Downstream 100 bases:
>100_bases CCCATGCATGAGGCCCGCGTGATCTGGCAATCCAGCGGTGACTTCGCCGCAAACCGCTACACGCGCGGGCATGTGTGGCG GTTCGATGGGGGGGCAGAGG
Product: formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS
Number of amino acids: Translated: 558; Mature: 557
Protein sequence:
>558_residues MGYKSDIEIAREAVKRPIQEIGAKIGIESADLLPYGHDKAKVSQSFINSVQNRDNGHLILVTAINPTPAGEGKTTTTVGL GDGLNRIGKNAMVCIREASLGPNFGMKGGAAGGGYAQVVPMEEMNLHFTGDFHAITSAHSLLSAMIDNHIYWGNELEIDV RRVVWRRVVDMNDRALRQITASLGGVANGFPREAGFDITVASEVMAILCLAKDLKDLQERLGAMIVAYRRDRSPVFARDI KADGAMTVLLKDAMQPNIVQTLENNPAFVHGGPFANIAHGCNSVIATTTALKLCDYVVTEAGFGADLGAEKFLNIKCRKA GLAPSVVVVVATVRAMKMNGGVAKADLGAENVDAVQNGCANLGRHIENVKSFGVPVVVAINHFVTDTDAEVQAVKDYVAS QGAEAVLSRHWELGSEGSAPLAEKVVEVIEKGEANFQTLYPDDMPLAEKIQAVCKGIYRADEAVMDKKILDQLKLWEDQG YGKLPVCMAKTQYSFTTDPNERGAPTGFTIPVREVRLSAGAGFIVAVCGEIMTMPGLPRKPSAEAIHLNDDGQIEGLF
Sequences:
>Translated_558_residues MGYKSDIEIAREAVKRPIQEIGAKIGIESADLLPYGHDKAKVSQSFINSVQNRDNGHLILVTAINPTPAGEGKTTTTVGL GDGLNRIGKNAMVCIREASLGPNFGMKGGAAGGGYAQVVPMEEMNLHFTGDFHAITSAHSLLSAMIDNHIYWGNELEIDV RRVVWRRVVDMNDRALRQITASLGGVANGFPREAGFDITVASEVMAILCLAKDLKDLQERLGAMIVAYRRDRSPVFARDI KADGAMTVLLKDAMQPNIVQTLENNPAFVHGGPFANIAHGCNSVIATTTALKLCDYVVTEAGFGADLGAEKFLNIKCRKA GLAPSVVVVVATVRAMKMNGGVAKADLGAENVDAVQNGCANLGRHIENVKSFGVPVVVAINHFVTDTDAEVQAVKDYVAS QGAEAVLSRHWELGSEGSAPLAEKVVEVIEKGEANFQTLYPDDMPLAEKIQAVCKGIYRADEAVMDKKILDQLKLWEDQG YGKLPVCMAKTQYSFTTDPNERGAPTGFTIPVREVRLSAGAGFIVAVCGEIMTMPGLPRKPSAEAIHLNDDGQIEGLF >Mature_557_residues GYKSDIEIAREAVKRPIQEIGAKIGIESADLLPYGHDKAKVSQSFINSVQNRDNGHLILVTAINPTPAGEGKTTTTVGLG DGLNRIGKNAMVCIREASLGPNFGMKGGAAGGGYAQVVPMEEMNLHFTGDFHAITSAHSLLSAMIDNHIYWGNELEIDVR RVVWRRVVDMNDRALRQITASLGGVANGFPREAGFDITVASEVMAILCLAKDLKDLQERLGAMIVAYRRDRSPVFARDIK ADGAMTVLLKDAMQPNIVQTLENNPAFVHGGPFANIAHGCNSVIATTTALKLCDYVVTEAGFGADLGAEKFLNIKCRKAG LAPSVVVVVATVRAMKMNGGVAKADLGAENVDAVQNGCANLGRHIENVKSFGVPVVVAINHFVTDTDAEVQAVKDYVASQ GAEAVLSRHWELGSEGSAPLAEKVVEVIEKGEANFQTLYPDDMPLAEKIQAVCKGIYRADEAVMDKKILDQLKLWEDQGY GKLPVCMAKTQYSFTTDPNERGAPTGFTIPVREVRLSAGAGFIVAVCGEIMTMPGLPRKPSAEAIHLNDDGQIEGLF
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=619, Percent_Identity=43.1340872374798, Blast_Score=478, Evalue=1e-135, Organism=Homo sapiens, GI36796743, Length=619, Percent_Identity=43.4571890145396, Blast_Score=469, Evalue=1e-132, Organism=Homo sapiens, GI310124614, Length=105, Percent_Identity=31.4285714285714, Blast_Score=77, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17568737, Length=622, Percent_Identity=43.0868167202572, Blast_Score=462, Evalue=1e-130, Organism=Caenorhabditis elegans, GI17568739, Length=622, Percent_Identity=43.0868167202572, Blast_Score=462, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6319558, Length=631, Percent_Identity=41.5213946117274, Blast_Score=462, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6321643, Length=626, Percent_Identity=41.6932907348243, Blast_Score=448, Evalue=1e-126, Organism=Drosophila melanogaster, GI24645718, Length=619, Percent_Identity=43.6187399030695, Blast_Score=482, Evalue=1e-136, Organism=Drosophila melanogaster, GI17137370, Length=619, Percent_Identity=43.6187399030695, Blast_Score=482, Evalue=1e-136, Organism=Drosophila melanogaster, GI62472483, Length=619, Percent_Identity=43.6187399030695, Blast_Score=481, Evalue=1e-136, Organism=Drosophila melanogaster, GI45551871, Length=619, Percent_Identity=43.6187399030695, Blast_Score=481, Evalue=1e-136,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FTHS_JANSC (Q28TR4)
Other databases:
- EMBL: CP000264 - RefSeq: YP_508923.1 - ProteinModelPortal: Q28TR4 - SMR: Q28TR4 - STRING: Q28TR4 - GeneID: 3933425 - GenomeReviews: CP000264_GR - KEGG: jan:Jann_0981 - eggNOG: COG2759 - HOGENOM: HBG677721 - OMA: EIMAVLC - PhylomeDB: Q28TR4 - ProtClustDB: PRK13505 - BioCyc: JSP290400:JANN_0981-MONOMER - HAMAP: MF_01543 - InterPro: IPR000559 - InterPro: IPR020628
Pfam domain/function: PF01268 FTHFS
EC number: =6.3.4.3
Molecular weight: Translated: 59829; Mature: 59698
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS00721 FTHFS_1; PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYKSDIEIAREAVKRPIQEIGAKIGIESADLLPYGHDKAKVSQSFINSVQNRDNGHLIL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE VTAINPTPAGEGKTTTTVGLGDGLNRIGKNAMVCIREASLGPNFGMKGGAAGGGYAQVVP EEEECCCCCCCCCCEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEE MEEMNLHFTGDFHAITSAHSLLSAMIDNHIYWGNELEIDVRRVVWRRVVDMNDRALRQIT HHHCCEEECCCHHHHHHHHHHHHHHHHCCEECCCEEEHHHHHHHHHHHHCCCHHHHHHHH ASLGGVANGFPREAGFDITVASEVMAILCLAKDLKDLQERLGAMIVAYRRDRSPVFARDI HHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHC KADGAMTVLLKDAMQPNIVQTLENNPAFVHGGPFANIAHGCNSVIATTTALKLCDYVVTE CCCCCEEEEEHHCCCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC AGFGADLGAEKFLNIKCRKAGLAPSVVVVVATVRAMKMNGGVAKADLGAENVDAVQNGCA CCCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH NLGRHIENVKSFGVPVVVAINHFVTDTDAEVQAVKDYVASQGAEAVLSRHWELGSEGSAP HHHHHHHHHHHCCCCEEEEEEHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCH LAEKVVEVIEKGEANFQTLYPDDMPLAEKIQAVCKGIYRADEAVMDKKILDQLKLWEDQG HHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YGKLPVCMAKTQYSFTTDPNERGAPTGFTIPVREVRLSAGAGFIVAVCGEIMTMPGLPRK CCCCCEEEEECCCEECCCCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHCCCCCCC PSAEAIHLNDDGQIEGLF CCCCEEEECCCCCEECCC >Mature Secondary Structure GYKSDIEIAREAVKRPIQEIGAKIGIESADLLPYGHDKAKVSQSFINSVQNRDNGHLIL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE VTAINPTPAGEGKTTTTVGLGDGLNRIGKNAMVCIREASLGPNFGMKGGAAGGGYAQVVP EEEECCCCCCCCCCEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEE MEEMNLHFTGDFHAITSAHSLLSAMIDNHIYWGNELEIDVRRVVWRRVVDMNDRALRQIT HHHCCEEECCCHHHHHHHHHHHHHHHHCCEECCCEEEHHHHHHHHHHHHCCCHHHHHHHH ASLGGVANGFPREAGFDITVASEVMAILCLAKDLKDLQERLGAMIVAYRRDRSPVFARDI HHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHC KADGAMTVLLKDAMQPNIVQTLENNPAFVHGGPFANIAHGCNSVIATTTALKLCDYVVTE CCCCCEEEEEHHCCCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC AGFGADLGAEKFLNIKCRKAGLAPSVVVVVATVRAMKMNGGVAKADLGAENVDAVQNGCA CCCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH NLGRHIENVKSFGVPVVVAINHFVTDTDAEVQAVKDYVASQGAEAVLSRHWELGSEGSAP HHHHHHHHHHHCCCCEEEEEEHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCH LAEKVVEVIEKGEANFQTLYPDDMPLAEKIQAVCKGIYRADEAVMDKKILDQLKLWEDQG HHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YGKLPVCMAKTQYSFTTDPNERGAPTGFTIPVREVRLSAGAGFIVAVCGEIMTMPGLPRK CCCCCEEEEECCCEECCCCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHCCCCCCC PSAEAIHLNDDGQIEGLF CCCCEEEECCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA