Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053446
Identifier: 89053446
GI number: 89053446
Start: 914315
End: 914794
Strand: Direct
Name: 89053446
Synonym: Jann_0955
Alternate gene names: NA
Gene position: 914315-914794 (Clockwise)
Preceding gene: 89053445
Following gene: 89053447
Centisome position: 21.17
GC content: 61.25
Gene sequence:
>480_bases ATGGCTGACCTGACGCACGAATTCTGGGACCGTCTAGAAGATGTCCGTTCGGGCATGTTGGGGATCAAAGGGCAGGGTCG TCTGATCCCGATGTCGCCGCAAACCGATGACGATGCCCCCGGCGCGATCTGGTTTATCACCGCCAAGGGCACCGATCTTG CCAAGGGCGTCGCCGCCGGTCCACAGCCCGCACAATTCGTCGTTTCCGACGACGGCGAGGGGCTCTATGCCGATCTTGAC GGGACGCTTGAGCGGTCAACTGATCGCGAAGCGCTCGACGAGTTCTGGAGCTTTGTCGCAGATGCCTGGTTCGACGGCGG TCAGCACGACCCCGACGTCTGCTTGCTGAAATTCACGCCTGCCTCGGGCGAGATTTCGATCACAGAAGGCGGCGGCGCGC GGTTCCTCTACGAGATCGCAAAAGCGCATCTGACGGACGAGACACCCGATATGGGCGAGCAGGCTACGGTGACCTTTTGA
Upstream 100 bases:
>100_bases GCCGCCCCATCCGGGCGGTCTTTTGCGTTTCCTGATCCATGGAACCCCGCGTGGACGACAGCTGTTGACCTTGTAACGAT GTAAAACAAGGAGATACCCC
Downstream 100 bases:
>100_bases CTTTGTGTCGCGAAGGTCACGTCCAACACCAGACTTGCGTTTCAGCACAAAGTGATATAAGTATGTTACATAAATGTAAC GCATATCGTCAGGTTACTTG
Product: putative general stress protein 26
Products: NA
Alternate protein names: General Stress ; Stress Protein
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MADLTHEFWDRLEDVRSGMLGIKGQGRLIPMSPQTDDDAPGAIWFITAKGTDLAKGVAAGPQPAQFVVSDDGEGLYADLD GTLERSTDREALDEFWSFVADAWFDGGQHDPDVCLLKFTPASGEISITEGGGARFLYEIAKAHLTDETPDMGEQATVTF
Sequences:
>Translated_159_residues MADLTHEFWDRLEDVRSGMLGIKGQGRLIPMSPQTDDDAPGAIWFITAKGTDLAKGVAAGPQPAQFVVSDDGEGLYADLD GTLERSTDREALDEFWSFVADAWFDGGQHDPDVCLLKFTPASGEISITEGGGARFLYEIAKAHLTDETPDMGEQATVTF >Mature_158_residues ADLTHEFWDRLEDVRSGMLGIKGQGRLIPMSPQTDDDAPGAIWFITAKGTDLAKGVAAGPQPAQFVVSDDGEGLYADLDG TLERSTDREALDEFWSFVADAWFDGGQHDPDVCLLKFTPASGEISITEGGGARFLYEIAKAHLTDETPDMGEQATVTF
Specific function: Unknown
COG id: COG3871
COG function: function code R; Uncharacterized stress protein (general stress protein 26)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17199; Mature: 17068
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLTHEFWDRLEDVRSGMLGIKGQGRLIPMSPQTDDDAPGAIWFITAKGTDLAKGVAAG CCCCCHHHHHHHHHHHHCCEEECCCCEEEECCCCCCCCCCCEEEEEEECCCCHHHCCCCC PQPAQFVVSDDGEGLYADLDGTLERSTDREALDEFWSFVADAWFDGGQHDPDVCLLKFTP CCCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC ASGEISITEGGGARFLYEIAKAHLTDETPDMGEQATVTF CCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEECC >Mature Secondary Structure ADLTHEFWDRLEDVRSGMLGIKGQGRLIPMSPQTDDDAPGAIWFITAKGTDLAKGVAAG CCCCHHHHHHHHHHHHCCEEECCCCEEEECCCCCCCCCCCEEEEEEECCCCHHHCCCCC PQPAQFVVSDDGEGLYADLDGTLERSTDREALDEFWSFVADAWFDGGQHDPDVCLLKFTP CCCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC ASGEISITEGGGARFLYEIAKAHLTDETPDMGEQATVTF CCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA