Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is dcp [H]
Identifier: 89053403
GI number: 89053403
Start: 867275
End: 869299
Strand: Direct
Name: dcp [H]
Synonym: Jann_0912
Alternate gene names: 89053403
Gene position: 867275-869299 (Clockwise)
Preceding gene: 89053402
Following gene: 89053404
Centisome position: 20.09
GC content: 62.17
Gene sequence:
>2025_bases ATGACCATGACCAATGCGCTGCTCGACACCTGGGATACGCCGTTTGAGATGCCACCGTTCGCGCGGATCAGCGACGCGGA TTTCGGCCCCGCGCTGGATGCGGCGTTGGACGAGGGCCGCGCAAGGGTGGCGGCGATTGCCGAGCAGTCCGAGGCGCCGA CATTTGCCAATACCGTCGACGCGTTGGAATTGGCGGATGAGGTGCTGGACCGGGTCGCAGGCGTGTTTTTCAACCTCGCC GGGGCCGATGCGACGCCTGAGCGCGAGGCATTGCAACGCGATTATGCGCCGAAGTTTGCGGCGTATTCGTCGGAAATCAC CAACAATACCAAACTTTTCGCGCGGATAGACGCGCTTTGGGAAAACCGCGATGCGCTGTCATTGAGTGAGGAGCAGGCCC GCGTCCTGCACCTGACGCATCGATCTTTCGTGCGCTCGGGCGCGGCGGTCAGAGGCGCGGACGGAGAGCGCCTGACCGAG GTCAAATCGCGCCTCGCCGTGTTGGGCACGCAGTTCATGCAGAACCTTCTGGCCGATGAGCGGGCGTGGTTCATGGACCT GTCTGAGGCGGACCTTGAAGGCCTTCCGGATTTCGTCATCGACGCCGCCCGTACGGCGGGCGAAGAGAAGGGCGCAGACG GTCCGGTCCTGACGCTATCGCGGTCGTTGATCGTGCCGTTTTTGCAGTTCTCGCCCCGGCGGGATCTGCGCGAAAGGGCG TATCGGGCCTGGGCCGCGCGTGGGGCAAACGGCGGTGAGACTGACAATCTGGGCATCGCGGCCGAGACGCTTGCGTTGCG CGAAGAACGGGCCAAGCTGCTGGGGTACAAGGATTTCGCGGCCTTCAAGTTGGAAACTGAAATGGCCGGATCGGCTGATA AAGTCCGCAATCTGTTGATGGCCGTGTGGGAGCCCGCGAAGGCGCAGGCAGAGGCGGATGCCGACAAGCTGACCGCGATG ATGGCCAAGGACGGGGTGAACGGCCCGTTGGAGCCTTGGGACTGGCGCTATTATTCCGAAAAGCGCCGCAAGGCGGAGCA TGATCTGGATGAGGCGGCGTTGAAGCCTTACCTGAGCCTTGAGGCAATGATCAACGCTGCCTTTGATTGCGCGACACGGC TGTTCGGGTTGGAGTTCAAAGCGCTCGATATCCCCCTCTACCACGCCGATGCCCGCGCGTGGGAAGTCACGCGGGACGGA AATCATGTCGCTGTTTTCATTGGTGATTACTTCGCGCGCGGATCAAAGCGGTCGGGCGCGTGGTGCTCGGCCATGCGGTC GCAAAAGAAGCTGGGTGGCGACACGCGACCCATCGTTGTGAACGTCTGCAACTTCGCCAAGGGCGACCCGGCGCTGCTGT CCTATGACGACGCGCGCACGCTGTTTCACGAGTTCGGCCACGCCCTGCACCAGATGCTGTCGGACGTGACCTATGGCTCC ATCTCCGGCACGTCTGTGGCGCGGGATTTTGTGGAACTGCCAAGCCAGCTGTATGAACATTGGCTGGAAGTGCCTGAAGT CCTTGAAACTTTCGCCACCCACGTGGAGACCGGCGAGCCGATGCCAAAGGCGTTGTTGGAGCGTCTTCTGGCGGCGCAGA CCTATGATATGGGATTCTCGACGGTGGAATATGTCGCGTCGGCCCTTGTGGATCTGGACTTCCACGACGGGGCAGCACCC GCTGATCCGATGGCCGCACAAAAGGCGACGCTGGAGCGTCTGGGAATGCCCCACGCGATCGAGATGCGCCACCGCACGCC GCAATTTGCCCATGTGTTTGCGGGCGATGGCTATTCCAGCGGCTACTACAGCTACATGTGGTCGGAGGTGATGGATGCCG ACGCGTTTGCAGCGTTTGAGGAGGCGGGCGGGCCGTTTGATCCGGCGTTGGCCAAGTCTCTGGAAGATAACATCCTGTCC GCCGGTGGCAGCCAGGAGGCGGACATTCTTTACACCGCATTCCGGGGGCGGATGCCGGGAGTTGAAGCACTTCTGAAAGG GCGCGGTTTGGACCGGGTTGCCTGA
Upstream 100 bases:
>100_bases GCGAGAGGCGCTGCCTCTCGCGCTCTCCGGGATATTTGCCGAACGGGGAAGGAGGGGGTGTAGGCGCTGGCATTCGGGCC TATGTAAGGGGCAAAGGAGA
Downstream 100 bases:
>100_bases CCAAAATCGCGCATGGGGTATATCAATGGTGCATCAATTTGCGATTGCCCTGATCGTGGGCGCCGCATTGCCCGGGCCGG TCGCTGCTCAAACTGATCCC
Product: peptidyl-dipeptidase Dcp
Products: NA
Alternate protein names: Dipeptidyl carboxypeptidase [H]
Number of amino acids: Translated: 674; Mature: 673
Protein sequence:
>674_residues MTMTNALLDTWDTPFEMPPFARISDADFGPALDAALDEGRARVAAIAEQSEAPTFANTVDALELADEVLDRVAGVFFNLA GADATPEREALQRDYAPKFAAYSSEITNNTKLFARIDALWENRDALSLSEEQARVLHLTHRSFVRSGAAVRGADGERLTE VKSRLAVLGTQFMQNLLADERAWFMDLSEADLEGLPDFVIDAARTAGEEKGADGPVLTLSRSLIVPFLQFSPRRDLRERA YRAWAARGANGGETDNLGIAAETLALREERAKLLGYKDFAAFKLETEMAGSADKVRNLLMAVWEPAKAQAEADADKLTAM MAKDGVNGPLEPWDWRYYSEKRRKAEHDLDEAALKPYLSLEAMINAAFDCATRLFGLEFKALDIPLYHADARAWEVTRDG NHVAVFIGDYFARGSKRSGAWCSAMRSQKKLGGDTRPIVVNVCNFAKGDPALLSYDDARTLFHEFGHALHQMLSDVTYGS ISGTSVARDFVELPSQLYEHWLEVPEVLETFATHVETGEPMPKALLERLLAAQTYDMGFSTVEYVASALVDLDFHDGAAP ADPMAAQKATLERLGMPHAIEMRHRTPQFAHVFAGDGYSSGYYSYMWSEVMDADAFAAFEEAGGPFDPALAKSLEDNILS AGGSQEADILYTAFRGRMPGVEALLKGRGLDRVA
Sequences:
>Translated_674_residues MTMTNALLDTWDTPFEMPPFARISDADFGPALDAALDEGRARVAAIAEQSEAPTFANTVDALELADEVLDRVAGVFFNLA GADATPEREALQRDYAPKFAAYSSEITNNTKLFARIDALWENRDALSLSEEQARVLHLTHRSFVRSGAAVRGADGERLTE VKSRLAVLGTQFMQNLLADERAWFMDLSEADLEGLPDFVIDAARTAGEEKGADGPVLTLSRSLIVPFLQFSPRRDLRERA YRAWAARGANGGETDNLGIAAETLALREERAKLLGYKDFAAFKLETEMAGSADKVRNLLMAVWEPAKAQAEADADKLTAM MAKDGVNGPLEPWDWRYYSEKRRKAEHDLDEAALKPYLSLEAMINAAFDCATRLFGLEFKALDIPLYHADARAWEVTRDG NHVAVFIGDYFARGSKRSGAWCSAMRSQKKLGGDTRPIVVNVCNFAKGDPALLSYDDARTLFHEFGHALHQMLSDVTYGS ISGTSVARDFVELPSQLYEHWLEVPEVLETFATHVETGEPMPKALLERLLAAQTYDMGFSTVEYVASALVDLDFHDGAAP ADPMAAQKATLERLGMPHAIEMRHRTPQFAHVFAGDGYSSGYYSYMWSEVMDADAFAAFEEAGGPFDPALAKSLEDNILS AGGSQEADILYTAFRGRMPGVEALLKGRGLDRVA >Mature_673_residues TMTNALLDTWDTPFEMPPFARISDADFGPALDAALDEGRARVAAIAEQSEAPTFANTVDALELADEVLDRVAGVFFNLAG ADATPEREALQRDYAPKFAAYSSEITNNTKLFARIDALWENRDALSLSEEQARVLHLTHRSFVRSGAAVRGADGERLTEV KSRLAVLGTQFMQNLLADERAWFMDLSEADLEGLPDFVIDAARTAGEEKGADGPVLTLSRSLIVPFLQFSPRRDLRERAY RAWAARGANGGETDNLGIAAETLALREERAKLLGYKDFAAFKLETEMAGSADKVRNLLMAVWEPAKAQAEADADKLTAMM AKDGVNGPLEPWDWRYYSEKRRKAEHDLDEAALKPYLSLEAMINAAFDCATRLFGLEFKALDIPLYHADARAWEVTRDGN HVAVFIGDYFARGSKRSGAWCSAMRSQKKLGGDTRPIVVNVCNFAKGDPALLSYDDARTLFHEFGHALHQMLSDVTYGSI SGTSVARDFVELPSQLYEHWLEVPEVLETFATHVETGEPMPKALLERLLAAQTYDMGFSTVEYVASALVDLDFHDGAAPA DPMAAQKATLERLGMPHAIEMRHRTPQFAHVFAGDGYSSGYYSYMWSEVMDADAFAAFEEAGGPFDPALAKSLEDNILSA GGSQEADILYTAFRGRMPGVEALLKGRGLDRVA
Specific function: Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides [H]
COG id: COG0339
COG function: function code E; Zn-dependent oligopeptidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3 family [H]
Homologues:
Organism=Homo sapiens, GI4507491, Length=591, Percent_Identity=28.7648054145516, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI14149738, Length=593, Percent_Identity=27.8246205733558, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI156105687, Length=575, Percent_Identity=25.7391304347826, Blast_Score=142, Evalue=1e-33, Organism=Escherichia coli, GI1787819, Length=684, Percent_Identity=34.7953216374269, Blast_Score=402, Evalue=1e-113, Organism=Escherichia coli, GI1789913, Length=688, Percent_Identity=34.7383720930233, Blast_Score=367, Evalue=1e-102, Organism=Caenorhabditis elegans, GI32565901, Length=600, Percent_Identity=21.8333333333333, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71999758, Length=336, Percent_Identity=23.8095238095238, Blast_Score=66, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6319793, Length=685, Percent_Identity=23.3576642335766, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6322715, Length=452, Percent_Identity=23.8938053097345, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI21356111, Length=491, Percent_Identity=25.4582484725051, Blast_Score=156, Evalue=4e-38, Organism=Drosophila melanogaster, GI20129717, Length=410, Percent_Identity=25.3658536585366, Blast_Score=122, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 [H]
Pfam domain/function: PF01432 Peptidase_M3 [H]
EC number: =3.4.15.5 [H]
Molecular weight: Translated: 74108; Mature: 73977
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMTNALLDTWDTPFEMPPFARISDADFGPALDAALDEGRARVAAIAEQSEAPTFANTVD CCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHH ALELADEVLDRVAGVFFNLAGADATPEREALQRDYAPKFAAYSSEITNNTKLFARIDALW HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHH ENRDALSLSEEQARVLHLTHRSFVRSGAAVRGADGERLTEVKSRLAVLGTQFMQNLLADE CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC RAWFMDLSEADLEGLPDFVIDAARTAGEEKGADGPVLTLSRSLIVPFLQFSPRRDLRERA HHHHHCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHH YRAWAARGANGGETDNLGIAAETLALREERAKLLGYKDFAAFKLETEMAGSADKVRNLLM HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEEEHHHCCCHHHHHHHHH AVWEPAKAQAEADADKLTAMMAKDGVNGPLEPWDWRYYSEKRRKAEHDLDEAALKPYLSL HHHCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH EAMINAAFDCATRLFGLEFKALDIPLYHADARAWEVTRDGNHVAVFIGDYFARGSKRSGA HHHHHHHHHHHHHHHCCEEEEEECEEEECCCCEEEEECCCCEEEEEEEHHHHCCCCCCCH WCSAMRSQKKLGGDTRPIVVNVCNFAKGDPALLSYDDARTLFHEFGHALHQMLSDVTYGS HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCC ISGTSVARDFVELPSQLYEHWLEVPEVLETFATHVETGEPMPKALLERLLAAQTYDMGFS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH TVEYVASALVDLDFHDGAAPADPMAAQKATLERLGMPHAIEMRHRTPQFAHVFAGDGYSS HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHCCCCCEEEEEECCCCCC GYYSYMWSEVMDADAFAAFEEAGGPFDPALAKSLEDNILSAGGSQEADILYTAFRGRMPG CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC VEALLKGRGLDRVA HHHHHHCCCCCCCC >Mature Secondary Structure TMTNALLDTWDTPFEMPPFARISDADFGPALDAALDEGRARVAAIAEQSEAPTFANTVD CCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHH ALELADEVLDRVAGVFFNLAGADATPEREALQRDYAPKFAAYSSEITNNTKLFARIDALW HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHH ENRDALSLSEEQARVLHLTHRSFVRSGAAVRGADGERLTEVKSRLAVLGTQFMQNLLADE CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC RAWFMDLSEADLEGLPDFVIDAARTAGEEKGADGPVLTLSRSLIVPFLQFSPRRDLRERA HHHHHCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHH YRAWAARGANGGETDNLGIAAETLALREERAKLLGYKDFAAFKLETEMAGSADKVRNLLM HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEEEHHHCCCHHHHHHHHH AVWEPAKAQAEADADKLTAMMAKDGVNGPLEPWDWRYYSEKRRKAEHDLDEAALKPYLSL HHHCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH EAMINAAFDCATRLFGLEFKALDIPLYHADARAWEVTRDGNHVAVFIGDYFARGSKRSGA HHHHHHHHHHHHHHHCCEEEEEECEEEECCCCEEEEECCCCEEEEEEEHHHHCCCCCCCH WCSAMRSQKKLGGDTRPIVVNVCNFAKGDPALLSYDDARTLFHEFGHALHQMLSDVTYGS HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCC ISGTSVARDFVELPSQLYEHWLEVPEVLETFATHVETGEPMPKALLERLLAAQTYDMGFS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH TVEYVASALVDLDFHDGAAPADPMAAQKATLERLGMPHAIEMRHRTPQFAHVFAGDGYSS HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHCCCCCEEEEEECCCCCC GYYSYMWSEVMDADAFAAFEEAGGPFDPALAKSLEDNILSAGGSQEADILYTAFRGRMPG CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC VEALLKGRGLDRVA HHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1537804; 11677609 [H]