Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053331
Identifier: 89053331
GI number: 89053331
Start: 795351
End: 795689
Strand: Direct
Name: 89053331
Synonym: Jann_0840
Alternate gene names: NA
Gene position: 795351-795689 (Clockwise)
Preceding gene: 89053328
Following gene: 89053334
Centisome position: 18.42
GC content: 57.23
Gene sequence:
>339_bases ATGCCCAAAGAGGAATGGGGCGTTAAACGCGTCTGTCCCACAACCGGAAAACGCTTTTACGATCTGGGCGCAAGCCCCAT CGTCAGCCCCTACACGGGCGAAGTCGTTGTGCTTGAAACCGGCAAGGGCGGCGCGCAAAGCCTGGTGGCCGACAAGGCCG CGACAAAAGCAAAAGAGGCCGAGAGCGAAGACGAAGATCTGGTCCTCGACGACGATATCGACATCGAAGACGACGATGAT GCCGATCTGCCAGATGACGATGTGCTCGACGATGATGACGAGGATACGGTCGCATTGGACGATATCGCGGACGTTGCCTC GGATGATAACGACGACTGA
Upstream 100 bases:
>100_bases GAAAGGCTTTGACAGTCCCCAGCCACTATGGCAGAGCGCGGGTTCTCGCGAAACCGGCGATTGAAGCCGATGATTGAAGC CAGTGATTGAAGGGGATGTC
Downstream 100 bases:
>100_bases CGGTCTGGCCGGGATTCTCTGACCGGCGAGCGGATTTTTCGCTTGCACGGGTCGGGCCCCGGCCTTACACCGCCCGCCAA TGGGGCCTTAGCTCAGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MPKEEWGVKRVCPTTGKRFYDLGASPIVSPYTGEVVVLETGKGGAQSLVADKAATKAKEAESEDEDLVLDDDIDIEDDDD ADLPDDDVLDDDDEDTVALDDIADVASDDNDD
Sequences:
>Translated_112_residues MPKEEWGVKRVCPTTGKRFYDLGASPIVSPYTGEVVVLETGKGGAQSLVADKAATKAKEAESEDEDLVLDDDIDIEDDDD ADLPDDDVLDDDDEDTVALDDIADVASDDNDD >Mature_111_residues PKEEWGVKRVCPTTGKRFYDLGASPIVSPYTGEVVVLETGKGGAQSLVADKAATKAKEAESEDEDLVLDDDIDIEDDDDA DLPDDDVLDDDDEDTVALDDIADVASDDNDD
Specific function: Unknown
COG id: COG4530
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12035; Mature: 11904
Theoretical pI: Translated: 3.48; Mature: 3.48
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKEEWGVKRVCPTTGKRFYDLGASPIVSPYTGEVVVLETGKGGAQSLVADKAATKAKEA CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHC ESEDEDLVLDDDIDIEDDDDADLPDDDVLDDDDEDTVALDDIADVASDDNDD CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCC >Mature Secondary Structure PKEEWGVKRVCPTTGKRFYDLGASPIVSPYTGEVVVLETGKGGAQSLVADKAATKAKEA CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHC ESEDEDLVLDDDIDIEDDDDADLPDDDVLDDDDEDTVALDDIADVASDDNDD CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA