Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053327
Identifier: 89053327
GI number: 89053327
Start: 791371
End: 792333
Strand: Direct
Name: 89053327
Synonym: Jann_0836
Alternate gene names: NA
Gene position: 791371-792333 (Clockwise)
Preceding gene: 89053326
Following gene: 89053328
Centisome position: 18.33
GC content: 60.02
Gene sequence:
>963_bases ATGGCGCAAAAGGCAGTTGTCGCGTGCATGCGGAACGAGGCGATCTTCCTTCTGGAATGGATCGCTTACCAACTGGTGAT CGGCTTCGACCTTGTGGCTGTTGTGACGAACGATTGCACGGATGGGACCGACCGAATTCTGGACCGCCTGGCGGAGTTCG ACGACCGGATAATCCATATCCGAAACGAGATCGGTGAGGGTGAGAGCCCACAATTGGCAGGCATGCGGCACGCGCTGAAC CACCCGCGCATCGCCGAGGCGGAGTATCTGCTGCATTGCGATGCGGACGAGTTTCTCCACGTCTCCCGGGGGGCTGGACG GGTGGATGATCTGTTGGCCCACACCAAGGGCGCAGATTGCATTGCGTTGTCCTGGCGGCCCTTTGGCGATGCGGGGATTG AGAAATGGCCCGGCGGGTCGGTGATCGCGCAATGCACCATGGCGGATGCGAAGCTGCGCCTTCACACGGCCCTGCACAAG TGCATGTTCCGACCAGATCGGTTTGGCTATGCCATTGATCATATGCCGAAAGATCCGGTGGCCGACGATATTACGATGGT GAACGCCCGGGGCGACGCGATCCCGGCGCACGATCTGTTTCGCGCCTCATCCTCCCGGTTTCGCAACATCGACCCGGGGC TTTATTCCTGGGATGTGGCCTGCATTCATCACTACGCGATCCGGGCCAAAGATGTGTTTCTGATGAAGAATGTCCGGGGC GATGGAATGGCGATGCCGTCTGAGAAATACTTCGTCAATTCGTCTTTCTGGCGGCGTTACAACCGCAATCAGGTGGAGGT GCCCGAGGCGCAGCAGCACCTCTGGGCCGTGACCCGTATCACGCAGGAGTTGCGCGCGCTGTCCAATCGGATCAAGCGGG TCGAGCGGGATGCCCTGGCCGCCTATTTTGAGGCGCGCGATACCATTCTGGATGCAGAGCAGGTGGCGAAGTGGACGGCC TAG
Upstream 100 bases:
>100_bases TTCGCTACTCTGACCTCACCCCCCGAGCCGTTTGGTGGACGCAAACCAGCCTGCCCACTAGCGTATCACCTGAACCGGAT CCGATCAGGGCGTGCGAGTC
Downstream 100 bases:
>100_bases GCCGGGCCGCGTGATCGCGGCAAAGCAGTGCAGGCTGTGGTTGTCTGCCCGGGGCGGCGGGCGTAACGTGCGCTTAACCG AATGACCCCGATGGAGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MAQKAVVACMRNEAIFLLEWIAYQLVIGFDLVAVVTNDCTDGTDRILDRLAEFDDRIIHIRNEIGEGESPQLAGMRHALN HPRIAEAEYLLHCDADEFLHVSRGAGRVDDLLAHTKGADCIALSWRPFGDAGIEKWPGGSVIAQCTMADAKLRLHTALHK CMFRPDRFGYAIDHMPKDPVADDITMVNARGDAIPAHDLFRASSSRFRNIDPGLYSWDVACIHHYAIRAKDVFLMKNVRG DGMAMPSEKYFVNSSFWRRYNRNQVEVPEAQQHLWAVTRITQELRALSNRIKRVERDALAAYFEARDTILDAEQVAKWTA
Sequences:
>Translated_320_residues MAQKAVVACMRNEAIFLLEWIAYQLVIGFDLVAVVTNDCTDGTDRILDRLAEFDDRIIHIRNEIGEGESPQLAGMRHALN HPRIAEAEYLLHCDADEFLHVSRGAGRVDDLLAHTKGADCIALSWRPFGDAGIEKWPGGSVIAQCTMADAKLRLHTALHK CMFRPDRFGYAIDHMPKDPVADDITMVNARGDAIPAHDLFRASSSRFRNIDPGLYSWDVACIHHYAIRAKDVFLMKNVRG DGMAMPSEKYFVNSSFWRRYNRNQVEVPEAQQHLWAVTRITQELRALSNRIKRVERDALAAYFEARDTILDAEQVAKWTA >Mature_319_residues AQKAVVACMRNEAIFLLEWIAYQLVIGFDLVAVVTNDCTDGTDRILDRLAEFDDRIIHIRNEIGEGESPQLAGMRHALNH PRIAEAEYLLHCDADEFLHVSRGAGRVDDLLAHTKGADCIALSWRPFGDAGIEKWPGGSVIAQCTMADAKLRLHTALHKC MFRPDRFGYAIDHMPKDPVADDITMVNARGDAIPAHDLFRASSSRFRNIDPGLYSWDVACIHHYAIRAKDVFLMKNVRGD GMAMPSEKYFVNSSFWRRYNRNQVEVPEAQQHLWAVTRITQELRALSNRIKRVERDALAAYFEARDTILDAEQVAKWTA
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36264; Mature: 36133
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQKAVVACMRNEAIFLLEWIAYQLVIGFDLVAVVTNDCTDGTDRILDRLAEFDDRIIHI CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEHHCCCCCCCHHHHHHHHHHHHHHEEEE RNEIGEGESPQLAGMRHALNHPRIAEAEYLLHCDADEFLHVSRGAGRVDDLLAHTKGADC HHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHCCCCCHHHHHHHHCCCCCE IALSWRPFGDAGIEKWPGGSVIAQCTMADAKLRLHTALHKCMFRPDRFGYAIDHMPKDPV EEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCC ADDITMVNARGDAIPAHDLFRASSSRFRNIDPGLYSWDVACIHHYAIRAKDVFLMKNVRG CCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCC DGMAMPSEKYFVNSSFWRRYNRNQVEVPEAQQHLWAVTRITQELRALSNRIKRVERDALA CCCCCCCCCEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYFEARDTILDAEQVAKWTA HHHHHHHHHHCHHHHHHCCC >Mature Secondary Structure AQKAVVACMRNEAIFLLEWIAYQLVIGFDLVAVVTNDCTDGTDRILDRLAEFDDRIIHI CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEHHCCCCCCCHHHHHHHHHHHHHHEEEE RNEIGEGESPQLAGMRHALNHPRIAEAEYLLHCDADEFLHVSRGAGRVDDLLAHTKGADC HHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHCCCCCHHHHHHHHCCCCCE IALSWRPFGDAGIEKWPGGSVIAQCTMADAKLRLHTALHKCMFRPDRFGYAIDHMPKDPV EEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCC ADDITMVNARGDAIPAHDLFRASSSRFRNIDPGLYSWDVACIHHYAIRAKDVFLMKNVRG CCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCC DGMAMPSEKYFVNSSFWRRYNRNQVEVPEAQQHLWAVTRITQELRALSNRIKRVERDALA CCCCCCCCCEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYFEARDTILDAEQVAKWTA HHHHHHHHHHCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA