Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is tagD [H]
Identifier: 89053310
GI number: 89053310
Start: 776536
End: 777099
Strand: Direct
Name: tagD [H]
Synonym: Jann_0819
Alternate gene names: 89053310
Gene position: 776536-777099 (Clockwise)
Preceding gene: 89053309
Following gene: 89053311
Centisome position: 17.98
GC content: 57.45
Gene sequence:
>564_bases GTGTTCGCATCCGGCCCCTTTTTTGTGCGCGGCGCGGGGCGAGATAATCCTTGCGGGGGCGGGCGCAAGTTGATTCAATC CCGCCAACAACGGGCGAGGCAGATCTTGGGCAAACGGATCATCACCTATGGGACGTTTGATCTGTTCCACATCGGGCATG TGCGCCTGCTCAAACGACTGGCCGATCTGGGCGATCACCTGACGGTTTGCGTGTCCACCGACGAGTTCAATGCGGTCAAA GGAAAGAAAACCGTTGTTCCCTATGATCAGCGGGCCGAGATCGTGGCCGCCTGCCAGTATGTGGACGCCGTGTTGCCCGA GGAAGATTGGGAGCAGAAGCGCGACGACATCGTGCGAGAGAAGATCGACATCTTCGCGATGGGCGACGATTGGAGCGGCA CGTTCAACGACCTCAGCGACATTTGCGAAGTGTTCTATTTGCCGCGCACGGAAGATGTTTCCTCGACCTCTCTCAAATCC TTCATGGAGGCGTTGCGGGACGAGCAGCTGAAAGAGGTCAAGCATCTGATCGAGACGTTGAATGCCAAGGCGTCCGGTTT GTGA
Upstream 100 bases:
>100_bases TCGATAATTCCGTCGCTGCGGTGAACGGTCTGGTTGAGGCTTGCAAGGCCATCGACGAAACGCTGTCCTAAGCGTCGTTT GAGAGTGTGAAGGGGGTCGG
Downstream 100 bases:
>100_bases GCGCGCGGATGGAAGGTGGAGCCAACGATGGTGAGTGAGCAGGTCCGAGAGCGCGCGAAAGCGGGGCCGATCCCCAAGGC GGATTATCAGGCGCTGTTCG
Product: glycerol-3-phosphate cytidylyltransferase
Products: NA
Alternate protein names: GCT; Gro-PCT; CDP-glycerol pyrophosphorylase; Teichoic acid biosynthesis protein D [H]
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MFASGPFFVRGAGRDNPCGGGRKLIQSRQQRARQILGKRIITYGTFDLFHIGHVRLLKRLADLGDHLTVCVSTDEFNAVK GKKTVVPYDQRAEIVAACQYVDAVLPEEDWEQKRDDIVREKIDIFAMGDDWSGTFNDLSDICEVFYLPRTEDVSSTSLKS FMEALRDEQLKEVKHLIETLNAKASGL
Sequences:
>Translated_187_residues MFASGPFFVRGAGRDNPCGGGRKLIQSRQQRARQILGKRIITYGTFDLFHIGHVRLLKRLADLGDHLTVCVSTDEFNAVK GKKTVVPYDQRAEIVAACQYVDAVLPEEDWEQKRDDIVREKIDIFAMGDDWSGTFNDLSDICEVFYLPRTEDVSSTSLKS FMEALRDEQLKEVKHLIETLNAKASGL >Mature_187_residues MFASGPFFVRGAGRDNPCGGGRKLIQSRQQRARQILGKRIITYGTFDLFHIGHVRLLKRLADLGDHLTVCVSTDEFNAVK GKKTVVPYDQRAEIVAACQYVDAVLPEEDWEQKRDDIVREKIDIFAMGDDWSGTFNDLSDICEVFYLPRTEDVSSTSLKS FMEALRDEQLKEVKHLIETLNAKASGL
Specific function: Provides activated glycerol phosphate for teichoic acid synthesis, via incorporation into both the linkage unit and the teichoic acid polymer by TagB and TagF [H]
COG id: COG0615
COG function: function code MI; Cytidylyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR006409 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.39 [H]
Molecular weight: Translated: 21127; Mature: 21127
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFASGPFFVRGAGRDNPCGGGRKLIQSRQQRARQILGKRIITYGTFDLFHIGHVRLLKRL CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ADLGDHLTVCVSTDEFNAVKGKKTVVPYDQRAEIVAACQYVDAVLPEEDWEQKRDDIVRE HHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH KIDIFAMGDDWSGTFNDLSDICEVFYLPRTEDVSSTSLKSFMEALRDEQLKEVKHLIETL HHHEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NAKASGL HHHCCCC >Mature Secondary Structure MFASGPFFVRGAGRDNPCGGGRKLIQSRQQRARQILGKRIITYGTFDLFHIGHVRLLKRL CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ADLGDHLTVCVSTDEFNAVKGKKTVVPYDQRAEIVAACQYVDAVLPEEDWEQKRDDIVRE HHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH KIDIFAMGDDWSGTFNDLSDICEVFYLPRTEDVSSTSLKSFMEALRDEQLKEVKHLIETL HHHEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NAKASGL HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1906926; 8393871; 9384377; 9182537; 11487587; 10508782 [H]