Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053208
Identifier: 89053208
GI number: 89053208
Start: 687092
End: 687637
Strand: Direct
Name: 89053208
Synonym: Jann_0717
Alternate gene names: NA
Gene position: 687092-687637 (Clockwise)
Preceding gene: 89053207
Following gene: 89053209
Centisome position: 15.91
GC content: 63.92
Gene sequence:
>546_bases ATGCTGCGTGCGCTTGCCCTTGTTTTTATGACCATCCCAATGCTCTCCCCCGTTCAGGCGCAGGACATTGCGCCGCCGGC GGAGGAGGCTGCCCCCGACGCCGCCACACCCATGACCTTGCCACGCCTCGCCGCGATCCTGTCGGCCATTGATGAGAACG CCACGGTCGAACCCCGTGGCATCACGCTGACTGTTGCGAGTATTCCCGTGACCGTCGTTGTGGATCCGCGCGCCAACCGG ATGCGCGTGCTGGTGCCAATCTCCTCCTCCGATGCGCTATCGGAGGAGGATCTGATGCGCCTGATGCAAGCCAATTTCGA CACCGCCCTCGATGCCCGCTATGCGGTCGCGCACGGGCGGCTCTGGTCCACCTTCATTCACCCGCTGGCCGAATTGCAGC CTGATCAGCTGATCTCCGGCCTCGCCCAAACCGTGACGCTCGCGCAGACCTACGGCGATACCTATACATCCGGCGCGATT ATGTTCGGGGGCGGCGACACGCGCGGCCTGATCCGGCAGTTGCAGGAGCTGGGCGAAGAGTTGTAA
Upstream 100 bases:
>100_bases GTCTAGGCACGCAGGCGTGACCGGCGGTGAGGCGCTTCGCCCTTTGTCCGGCGCGTTCAACCGGCTAGCGTAGCCCAAAG CCCTAGTTCCGGAGGCCCCC
Downstream 100 bases:
>100_bases GGCCCTCGGTCCTGGAAGCTTCATTTTTTTGAACTGGCTGATAGGCTACCTTGTACAAGGGCGGCGATGGACGTTTAACG CCCGGTGTCGTGGGGGCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MLRALALVFMTIPMLSPVQAQDIAPPAEEAAPDAATPMTLPRLAAILSAIDENATVEPRGITLTVASIPVTVVVDPRANR MRVLVPISSSDALSEEDLMRLMQANFDTALDARYAVAHGRLWSTFIHPLAELQPDQLISGLAQTVTLAQTYGDTYTSGAI MFGGGDTRGLIRQLQELGEEL
Sequences:
>Translated_181_residues MLRALALVFMTIPMLSPVQAQDIAPPAEEAAPDAATPMTLPRLAAILSAIDENATVEPRGITLTVASIPVTVVVDPRANR MRVLVPISSSDALSEEDLMRLMQANFDTALDARYAVAHGRLWSTFIHPLAELQPDQLISGLAQTVTLAQTYGDTYTSGAI MFGGGDTRGLIRQLQELGEEL >Mature_181_residues MLRALALVFMTIPMLSPVQAQDIAPPAEEAAPDAATPMTLPRLAAILSAIDENATVEPRGITLTVASIPVTVVVDPRANR MRVLVPISSSDALSEEDLMRLMQANFDTALDARYAVAHGRLWSTFIHPLAELQPDQLISGLAQTVTLAQTYGDTYTSGAI MFGGGDTRGLIRQLQELGEEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19412; Mature: 19412
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRALALVFMTIPMLSPVQAQDIAPPAEEAAPDAATPMTLPRLAAILSAIDENATVEPRG CHHHHHHHHHHHHCCCCCCHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC ITLTVASIPVTVVVDPRANRMRVLVPISSSDALSEEDLMRLMQANFDTALDARYAVAHGR EEEEEECCCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCH LWSTFIHPLAELQPDQLISGLAQTVTLAQTYGDTYTSGAIMFGGGDTRGLIRQLQELGEE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHC L C >Mature Secondary Structure MLRALALVFMTIPMLSPVQAQDIAPPAEEAAPDAATPMTLPRLAAILSAIDENATVEPRG CHHHHHHHHHHHHCCCCCCHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC ITLTVASIPVTVVVDPRANRMRVLVPISSSDALSEEDLMRLMQANFDTALDARYAVAHGR EEEEEECCCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCH LWSTFIHPLAELQPDQLISGLAQTVTLAQTYGDTYTSGAIMFGGGDTRGLIRQLQELGEE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA