Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is cmk
Identifier: 89053206
GI number: 89053206
Start: 686079
End: 686693
Strand: Direct
Name: cmk
Synonym: Jann_0715
Alternate gene names: 89053206
Gene position: 686079-686693 (Clockwise)
Preceding gene: 89053205
Following gene: 89053207
Centisome position: 15.89
GC content: 67.32
Gene sequence:
>615_bases ATGAGATTTACTGTTGCCATTGATGGGCCTGCCGCGGCGGGCAAGGGAACGATCGGCCGTGCTGTGGCTGATGCATTCGG GTTCGGGCACCTGGACACGGGGTTGTTGTACCGCGCCGTGGGTGCTCGCGTGTTACGGGGGGAGCGGGCCGAGGAGGCAG CCCTTGCCTTGACGCCAGACGACCTCGCCCATCCGGATGCGCTTCGCACGCCCGATGTGGCGCAAGCGGCCTCCAAGGTC GCGGTGATCCCCGAGGTCCGCGATGCCCTGCTGGAGTTTCAACGCGCGTTCGCCCACCGCATCGGCGGTGCGGTGCTGGA CGGGCGCGACATCGGCACCGTGATTTGTCCCCGTGCGGAGGTAAAACTGTTCGTGACGGCCAGTGCCGAGGTTCGTGCCA GGCGCCGCATGGACGAGCTGACGGGCCGAGGGCTGGAGGCCGACTATGACACCGTCCTGGCCGATGTGCGCGCCCGCGAT GCCCGCGATGCGGACCGCGCCACGGCCCCGATGACGGCCGCAGACGATGCCCTGACGCTTGATACAAGTGAAATGTCGGC AGAGGCCGCGATTGCCGCCGCGATTGCTGCCGTGAAGGCGAAACGTGGCGATTGA
Upstream 100 bases:
>100_bases AGATGATCCTGGCCGCCAGCACCGCGACGGTCGCGAAATACGGAGCCTTGATGGTCAGCGTGATTGCACTAGGGGCCGCA TTTGTGACAACCAGAACCCC
Downstream 100 bases:
>100_bases GACGGCGCAGCTGATCGTCACGCGAGAGGGCGGATATGCCGATTACTTGCGCGCCTACCGCATCCTTGTTGATGATATCG AGATGGGTCGGATCAAACGC
Product: cytidylate kinase
Products: NA
Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase [H]
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MRFTVAIDGPAAAGKGTIGRAVADAFGFGHLDTGLLYRAVGARVLRGERAEEAALALTPDDLAHPDALRTPDVAQAASKV AVIPEVRDALLEFQRAFAHRIGGAVLDGRDIGTVICPRAEVKLFVTASAEVRARRRMDELTGRGLEADYDTVLADVRARD ARDADRATAPMTAADDALTLDTSEMSAEAAIAAAIAAVKAKRGD
Sequences:
>Translated_204_residues MRFTVAIDGPAAAGKGTIGRAVADAFGFGHLDTGLLYRAVGARVLRGERAEEAALALTPDDLAHPDALRTPDVAQAASKV AVIPEVRDALLEFQRAFAHRIGGAVLDGRDIGTVICPRAEVKLFVTASAEVRARRRMDELTGRGLEADYDTVLADVRARD ARDADRATAPMTAADDALTLDTSEMSAEAAIAAAIAAVKAKRGD >Mature_204_residues MRFTVAIDGPAAAGKGTIGRAVADAFGFGHLDTGLLYRAVGARVLRGERAEEAALALTPDDLAHPDALRTPDVAQAASKV AVIPEVRDALLEFQRAFAHRIGGAVLDGRDIGTVICPRAEVKLFVTASAEVRARRRMDELTGRGLEADYDTVLADVRARD ARDADRATAPMTAADDALTLDTSEMSAEAAIAAAIAAVKAKRGD
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787139, Length=219, Percent_Identity=39.2694063926941, Blast_Score=141, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003136 - InterPro: IPR011994 [H]
Pfam domain/function: PF02224 Cytidylate_kin [H]
EC number: =2.7.4.14 [H]
Molecular weight: Translated: 21377; Mature: 21377
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFTVAIDGPAAAGKGTIGRAVADAFGFGHLDTGLLYRAVGARVLRGERAEEAALALTPD CEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCH DLAHPDALRTPDVAQAASKVAVIPEVRDALLEFQRAFAHRIGGAVLDGRDIGTVICPRAE HHCCCCCCCCCHHHHHHHHEEECHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCC VKLFVTASAEVRARRRMDELTGRGLEADYDTVLADVRARDARDADRATAPMTAADDALTL EEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEE DTSEMSAEAAIAAAIAAVKAKRGD CHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRFTVAIDGPAAAGKGTIGRAVADAFGFGHLDTGLLYRAVGARVLRGERAEEAALALTPD CEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCH DLAHPDALRTPDVAQAASKVAVIPEVRDALLEFQRAFAHRIGGAVLDGRDIGTVICPRAE HHCCCCCCCCCHHHHHHHHEEECHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCC VKLFVTASAEVRARRRMDELTGRGLEADYDTVLADVRARDARDADRATAPMTAADDALTL EEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEE DTSEMSAEAAIAAAIAAVKAKRGD CHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA