| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658266
Identifier: 88658266
GI number: 88658266
Start: 1010347
End: 1010886
Strand: Reverse
Name: 88658266
Synonym: ECH_0986
Alternate gene names: NA
Gene position: 1010886-1010347 (Counterclockwise)
Preceding gene: 88657642
Following gene: 88657965
Centisome position: 85.94
GC content: 27.96
Gene sequence:
>540_bases ATGAAAGCTAGTATAATATTATTGTCAATGATATTTTTGTGTACAATGTTTGGTATTCGATGTCAGGCTAGTCAGCGTGA TTGTCTTGGTTTAGTATATGCATTGCATCATTGTACAAGTTATACTTGTGAGATGGATTTTTTTAATAATAAGGTACAAT ATACAATTTTTGGATTAAGAAATAATAGTTGTAAATTAGTAGAGAAAGATGATTCAGGACTTACATTGTGTTATGTACCA AAAGAAAAATTAAAAGTAATGTCTGAGTATTTAGTAAGGGTGATCACAAGTAATTTGAATATTAATACTAGTAAAATTGA GGACATGTTGTTTGATGTGTGTAACTTTTATTCTGTGATCCAGGAAAGTTTAATACCAGAAAATGAAGAAGTTACTGAAC AAAATGTGCAAGAAATAAAACGTGCTGCAGAGTTAAAAAGAAGAAATTTTAATATTAGTAAGATTAAGAGTATATTTTTT TCAGACGAGGATATTATGAAACTACATACTATATATGCTCAAAGTCGTAGTATGCAATAA
Upstream 100 bases:
>100_bases ACAAATGAAGTATTGCAAGCTGTATTAAAAGGTGAAACTGTACCTGTTATACGTGGTACCATTTTATTTGAGTTGTATAA TATAGTAGGTAGGTTTGTTG
Downstream 100 bases:
>100_bases AGTTGAAAATGTGTATATAGGCATCCAATTTAAAAGGACGTAAAGCACTTGTCGAATAGTAATAGCTGTAAAAATTTAAA ATAAGTTATTTTTTATGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MKASIILLSMIFLCTMFGIRCQASQRDCLGLVYALHHCTSYTCEMDFFNNKVQYTIFGLRNNSCKLVEKDDSGLTLCYVP KEKLKVMSEYLVRVITSNLNINTSKIEDMLFDVCNFYSVIQESLIPENEEVTEQNVQEIKRAAELKRRNFNISKIKSIFF SDEDIMKLHTIYAQSRSMQ
Sequences:
>Translated_179_residues MKASIILLSMIFLCTMFGIRCQASQRDCLGLVYALHHCTSYTCEMDFFNNKVQYTIFGLRNNSCKLVEKDDSGLTLCYVP KEKLKVMSEYLVRVITSNLNINTSKIEDMLFDVCNFYSVIQESLIPENEEVTEQNVQEIKRAAELKRRNFNISKIKSIFF SDEDIMKLHTIYAQSRSMQ >Mature_179_residues MKASIILLSMIFLCTMFGIRCQASQRDCLGLVYALHHCTSYTCEMDFFNNKVQYTIFGLRNNSCKLVEKDDSGLTLCYVP KEKLKVMSEYLVRVITSNLNINTSKIEDMLFDVCNFYSVIQESLIPENEEVTEQNVQEIKRAAELKRRNFNISKIKSIFF SDEDIMKLHTIYAQSRSMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20804; Mature: 20804
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASIILLSMIFLCTMFGIRCQASQRDCLGLVYALHHCTSYTCEMDFFNNKVQYTIFGLR CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEEEEE NNSCKLVEKDDSGLTLCYVPKEKLKVMSEYLVRVITSNLNINTSKIEDMLFDVCNFYSVI CCCEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH QESLIPENEEVTEQNVQEIKRAAELKRRNFNISKIKSIFFSDEDIMKLHTIYAQSRSMQ HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKASIILLSMIFLCTMFGIRCQASQRDCLGLVYALHHCTSYTCEMDFFNNKVQYTIFGLR CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEEEEE NNSCKLVEKDDSGLTLCYVPKEKLKVMSEYLVRVITSNLNINTSKIEDMLFDVCNFYSVI CCCEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH QESLIPENEEVTEQNVQEIKRAAELKRRNFNISKIKSIFFSDEDIMKLHTIYAQSRSMQ HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA