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The map label for this gene is ssb [H]

Identifier: 88658209

GI number: 88658209

Start: 828627

End: 829100

Strand: Direct

Name: ssb [H]

Synonym: ECH_0815

Alternate gene names: 88658209

Gene position: 828627-829100 (Clockwise)

Preceding gene: 88657924

Following gene: 88657576

Centisome position: 70.45

GC content: 36.08

Gene sequence:

>474_bases
ATGTCCACTATTGGTGTAAATAAGGTAATTTTAATAGGCAATCTAGGCAAAGACCCAGATATTAGGGTAATGCAAAACGG
GAAGGAGATGGCAAGCTTCTCCATAGCTACATCGGAAAGCTGGGTAGATAAGGCATCAGGCATGCGCACAGAAAAAACAG
AATGGCACAATGTAGTAGTATTCAATGAAGGGTTAGTAAAAATTATAAAAAATTGCATACGCAAAGGAAGCAAGATATAC
ATTGAAGGGTCATTAAGAACAAGAAAATGGACAGACCAAAATAATGTAGATCGCTACACAACAGAGGTTATCCTACAAGG
GTTTAATTCAGCTTTGTATATGCTAGATGCTAAAAACAACACAATGGATAACAATGGTATATCAGAAGATTACGCTACTG
AAAGTTTCAATAAAGAAAATTCGCTAAACAGTAGTTGCGATGATATAATTATCGACGATGAGATACCATTCTAG

Upstream 100 bases:

>100_bases
ACCATTAGTCTATTTTTTTTAGAATATAATAAAAACTTATTGACTGATTTATTAATAAAATATGATAATAACAACTCTAA
TTTACGATGACGATACAGCT

Downstream 100 bases:

>100_bases
TCAACACTCTAATCTACTATGTATTAAACATTTAATCTTACTAGAACAACGCTATTGCACTATACCATTAATGTTCATAT
CAGAACTCTTTATAAGTTAC

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSTIGVNKVILIGNLGKDPDIRVMQNGKEMASFSIATSESWVDKASGMRTEKTEWHNVVVFNEGLVKIIKNCIRKGSKIY
IEGSLRTRKWTDQNNVDRYTTEVILQGFNSALYMLDAKNNTMDNNGISEDYATESFNKENSLNSSCDDIIIDDEIPF

Sequences:

>Translated_157_residues
MSTIGVNKVILIGNLGKDPDIRVMQNGKEMASFSIATSESWVDKASGMRTEKTEWHNVVVFNEGLVKIIKNCIRKGSKIY
IEGSLRTRKWTDQNNVDRYTTEVILQGFNSALYMLDAKNNTMDNNGISEDYATESFNKENSLNSSCDDIIIDDEIPF
>Mature_156_residues
STIGVNKVILIGNLGKDPDIRVMQNGKEMASFSIATSESWVDKASGMRTEKTEWHNVVVFNEGLVKIIKNCIRKGSKIYI
EGSLRTRKWTDQNNVDRYTTEVILQGFNSALYMLDAKNNTMDNNGISEDYATESFNKENSLNSSCDDIIIDDEIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=104, Percent_Identity=36.5384615384615, Blast_Score=76, Evalue=2e-14,
Organism=Escherichia coli, GI1790494, Length=120, Percent_Identity=53.3333333333333, Blast_Score=140, Evalue=4e-35,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17711; Mature: 17580

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIGVNKVILIGNLGKDPDIRVMQNGKEMASFSIATSESWVDKASGMRTEKTEWHNVVV
CCCCCCCEEEEEECCCCCCCEEEECCCCHHHEEEEECCHHHHHHHCCCCCCCCCCCEEEE
FNEGLVKIIKNCIRKGSKIYIEGSLRTRKWTDQNNVDRYTTEVILQGFNSALYMLDAKNN
ECCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCC
TMDNNGISEDYATESFNKENSLNSSCDDIIIDDEIPF
CCCCCCCCCCHHCCCCCCCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure 
STIGVNKVILIGNLGKDPDIRVMQNGKEMASFSIATSESWVDKASGMRTEKTEWHNVVV
CCCCCCEEEEEECCCCCCCEEEECCCCHHHEEEEECCHHHHHHHCCCCCCCCCCCEEEE
FNEGLVKIIKNCIRKGSKIYIEGSLRTRKWTDQNNVDRYTTEVILQGFNSALYMLDAKNN
ECCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCC
TMDNNGISEDYATESFNKENSLNSSCDDIIIDDEIPF
CCCCCCCCCCHHCCCCCCCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA