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The map label for this gene is 88658203

Identifier: 88658203

GI number: 88658203

Start: 647514

End: 648101

Strand: Direct

Name: 88658203

Synonym: ECH_0643

Alternate gene names: NA

Gene position: 647514-648101 (Clockwise)

Preceding gene: 88658096

Following gene: 88658336

Centisome position: 55.05

GC content: 26.87

Gene sequence:

>588_bases
ATGTTTTTATATAACTACTTGCCTTTCTTTAAAAAAAAGAAACAAGATCAAGATACCAACAAAATTTGCTATTCAGGAGG
AATAAGAAGATTTAGTAGTATATTAATAGATTTGACTATTTTAATATTTATCTTACAAATTATACACAACGTATACTCTT
ACTTTTTCATGCATGAAACAGATAACACTGTAATAAAAATTATAGAAAAATACAAAATGAGTGTACCATTAACCGCACAA
GAAGAACAAATTAAAAATAAACATGTATTTAAGGCTATTTGTGGACAAATTATTCAGATGATTGCACTTTACATATACGC
TGCATATAGTTGGACTAAATTCTCTGCAACACTGGGAAAATTTCTTACAGGATTAAGAGTTGTTGATGCAACAACTTTTC
AAAAAATAACACTATCTCAATCAACAAAGCGTATTTTTGGATCCATTCTTTCTTCTATTCCACTATGTTTAGGAATAGTA
TGGTGTAATTTTAATAAACGTAAACAAACATGGCATGATAAAATAGCAAATACTGTTGTAGTAACCAATAAGAGTTTAAA
AAATTACCATAATAATCATAACTTATGA

Upstream 100 bases:

>100_bases
TTCTTCTGATACCAGATGTATAATTTTTTATAAAATACTGTCACATTTAGTTTTATATAGTATAAATATCAATGTTGAGA
TAACTGAGAGTAATGTAAAA

Downstream 100 bases:

>100_bases
TTATAAAAAACACATTTTCTAGATAATTCTTTACTAGTACTACTAAAAACTAATCTATAATTATAAAAATGTTCTTGATA
AATATTTTATGCCAGTCAAG

Product: RDD family protein

Products: NA

Alternate protein names: RDD Domain Containing Protein; RDD Domain-Containing Protein; Membrane RDD Family Protein; Branched-Chain Amino Acid Aminotransferase I

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MFLYNYLPFFKKKKQDQDTNKICYSGGIRRFSSILIDLTILIFILQIIHNVYSYFFMHETDNTVIKIIEKYKMSVPLTAQ
EEQIKNKHVFKAICGQIIQMIALYIYAAYSWTKFSATLGKFLTGLRVVDATTFQKITLSQSTKRIFGSILSSIPLCLGIV
WCNFNKRKQTWHDKIANTVVVTNKSLKNYHNNHNL

Sequences:

>Translated_195_residues
MFLYNYLPFFKKKKQDQDTNKICYSGGIRRFSSILIDLTILIFILQIIHNVYSYFFMHETDNTVIKIIEKYKMSVPLTAQ
EEQIKNKHVFKAICGQIIQMIALYIYAAYSWTKFSATLGKFLTGLRVVDATTFQKITLSQSTKRIFGSILSSIPLCLGIV
WCNFNKRKQTWHDKIANTVVVTNKSLKNYHNNHNL
>Mature_195_residues
MFLYNYLPFFKKKKQDQDTNKICYSGGIRRFSSILIDLTILIFILQIIHNVYSYFFMHETDNTVIKIIEKYKMSVPLTAQ
EEQIKNKHVFKAICGQIIQMIALYIYAAYSWTKFSATLGKFLTGLRVVDATTFQKITLSQSTKRIFGSILSSIPLCLGIV
WCNFNKRKQTWHDKIANTVVVTNKSLKNYHNNHNL

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22737; Mature: 22737

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLYNYLPFFKKKKQDQDTNKICYSGGIRRFSSILIDLTILIFILQIIHNVYSYFFMHET
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DNTVIKIIEKYKMSVPLTAQEEQIKNKHVFKAICGQIIQMIALYIYAAYSWTKFSATLGK
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLTGLRVVDATTFQKITLSQSTKRIFGSILSSIPLCLGIVWCNFNKRKQTWHDKIANTVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCEEE
VTNKSLKNYHNNHNL
EECHHHHHHCCCCCC
>Mature Secondary Structure
MFLYNYLPFFKKKKQDQDTNKICYSGGIRRFSSILIDLTILIFILQIIHNVYSYFFMHET
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DNTVIKIIEKYKMSVPLTAQEEQIKNKHVFKAICGQIIQMIALYIYAAYSWTKFSATLGK
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLTGLRVVDATTFQKITLSQSTKRIFGSILSSIPLCLGIVWCNFNKRKQTWHDKIANTVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCEEE
VTNKSLKNYHNNHNL
EECHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA