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The map label for this gene is ypfH [C]

Identifier: 88658110

GI number: 88658110

Start: 955862

End: 956503

Strand: Reverse

Name: ypfH [C]

Synonym: ECH_0935

Alternate gene names: 88658110

Gene position: 956503-955862 (Counterclockwise)

Preceding gene: 88658649

Following gene: 88658265

Centisome position: 81.32

GC content: 33.02

Gene sequence:

>642_bases
ATGAGTATAGTTATTGATGGACCTAGTTTTACTTCTGGTGACTGTGCTAATGTTTTGGTTGTATTGCTTCATGGAAGAGG
AGCAACTGGTAATAGTATACTGTCAGTAGGACGTTTAATGGGTGAACTATTGCCTAATGCTCACTTTATAGCTCCTAATG
CTCATATGAAGTATGGAGATGCAGGGTATGCATGGTTTAATGGACGTGATTTTTCTGAAGATGTGATATTTGCTGATATG
GAAAAAACAGCTTTGATTGTGAATAATTTTATAGATTTACAATTGAAAAATACTGGATTGAGTGATGATAAGTTAGTTTT
AGCTGGGTTTTCTCAAGGAGCAATGTTAGCAGTACATATAGCATTGTTGAGGAAAAGAAAATGTGCTTCTGTAATATCTT
ATTCAGGGGCTATAATATGTCCAAATTACTTGAAACATAATATAAATGTAAAACCTGATATTTGTATAGTTCATGGTACA
GAAGATGATGTAGTGCCGTTCTCATTTTTTAATGATGCAGTTGGATTTTTGTTAGATCATAATGTGCCTTTAGAAAGTCA
TGCAATTCCTGGTTTAGATCATAGCATAAGTAATGCTTGTATAGAGATAGGAGCAAAATTTATAATGAATAAGATTTCTT
GA

Upstream 100 bases:

>100_bases
TGTATTGGTCATGCTATTACTGTTATTTATGCAATAATGTTTTTTGTTCAGTAAGTAGTGACCTATCATTTAAGTTGTTT
AATATATAGGGAGAGATATT

Downstream 100 bases:

>100_bases
ATCTTTAATCTCTAATTAGTTTTTTAATAAGTTCTTTAATATTTGATATGTGTTTTTACTGATGTATGAAATGCATTCTA
CATAGTAGTACTTTTCTTGA

Product: phospholipase/carboxylesterase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MSIVIDGPSFTSGDCANVLVVLLHGRGATGNSILSVGRLMGELLPNAHFIAPNAHMKYGDAGYAWFNGRDFSEDVIFADM
EKTALIVNNFIDLQLKNTGLSDDKLVLAGFSQGAMLAVHIALLRKRKCASVISYSGAIICPNYLKHNINVKPDICIVHGT
EDDVVPFSFFNDAVGFLLDHNVPLESHAIPGLDHSISNACIEIGAKFIMNKIS

Sequences:

>Translated_213_residues
MSIVIDGPSFTSGDCANVLVVLLHGRGATGNSILSVGRLMGELLPNAHFIAPNAHMKYGDAGYAWFNGRDFSEDVIFADM
EKTALIVNNFIDLQLKNTGLSDDKLVLAGFSQGAMLAVHIALLRKRKCASVISYSGAIICPNYLKHNINVKPDICIVHGT
EDDVVPFSFFNDAVGFLLDHNVPLESHAIPGLDHSISNACIEIGAKFIMNKIS
>Mature_212_residues
SIVIDGPSFTSGDCANVLVVLLHGRGATGNSILSVGRLMGELLPNAHFIAPNAHMKYGDAGYAWFNGRDFSEDVIFADME
KTALIVNNFIDLQLKNTGLSDDKLVLAGFSQGAMLAVHIALLRKRKCASVISYSGAIICPNYLKHNINVKPDICIVHGTE
DDVVPFSFFNDAVGFLLDHNVPLESHAIPGLDHSISNACIEIGAKFIMNKIS

Specific function: Unknown

COG id: COG0400

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003140 [H]

Pfam domain/function: PF02230 Abhydrolase_2 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 22971; Mature: 22840

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVIDGPSFTSGDCANVLVVLLHGRGATGNSILSVGRLMGELLPNAHFIAPNAHMKYGD
CEEEECCCCCCCCCHHEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCEEECC
AGYAWFNGRDFSEDVIFADMEKTALIVNNFIDLQLKNTGLSDDKLVLAGFSQGAMLAVHI
CCEEEECCCCCCCCEEEECCCHHEEEEECEEEEEECCCCCCCCCEEEEECCCCHHHHHHH
ALLRKRKCASVISYSGAIICPNYLKHNINVKPDICIVHGTEDDVVPFSFFNDAVGFLLDH
HHHHHHHHHHHHHCCCEEEECHHHHCCCCCCCCEEEEECCCCCEECHHHHHHHHHHEEEC
NVPLESHAIPGLDHSISNACIEIGAKFIMNKIS
CCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIVIDGPSFTSGDCANVLVVLLHGRGATGNSILSVGRLMGELLPNAHFIAPNAHMKYGD
EEEECCCCCCCCCHHEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCEEECC
AGYAWFNGRDFSEDVIFADMEKTALIVNNFIDLQLKNTGLSDDKLVLAGFSQGAMLAVHI
CCEEEECCCCCCCCEEEECCCHHEEEEECEEEEEECCCCCCCCCEEEEECCCCHHHHHHH
ALLRKRKCASVISYSGAIICPNYLKHNINVKPDICIVHGTEDDVVPFSFFNDAVGFLLDH
HHHHHHHHHHHHHCCCEEEECHHHHCCCCCCCCEEEEECCCCCEECHHHHHHHHHHEEEC
NVPLESHAIPGLDHSISNACIEIGAKFIMNKIS
CCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA