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The map label for this gene is perM [C]

Identifier: 88657814

GI number: 88657814

Start: 935108

End: 936247

Strand: Reverse

Name: perM [C]

Synonym: ECH_0910

Alternate gene names: 88657814

Gene position: 936247-935108 (Counterclockwise)

Preceding gene: 88657888

Following gene: 88658082

Centisome position: 79.6

GC content: 30.18

Gene sequence:

>1140_bases
ATGCATGTGCATAGACTAATGAGCGATCAATTTTGCAAGCTAATTAATAGGTATGTAACACGTAGTGTTATTGTACTAGC
AATTGTTTTGGTGATGTTTGTTATTAAACCTGTACTTGCTCCGTGTTGTACTGCTATGATAATGGCTTATCTTCTTAATC
CATTGGTGGATAAGTTACAAAGATTTAAACTATCAAGGCAACTATCTGTTGCTATAATTTTGCTATCTTCGTTGTGTGTA
ATTATAGCATTTTTGGTCAGTTTTATTCCCCTTGCTTATTCTCAGTTGTTATCACTTATAAAGTTTCTTATGGAAAAAGT
GCCATTGATTCATAAAGACAGTATCATTTCTCTCCTTCAGAAATATAATATGATTGATTATGAAGAAGTATCGGATGCAA
TAAAGTTGCCGCAAGCGTCTTTAAAAAGTTTGTTGCATTACGAAAACATTAAACCTCTTGTAAGTATTTTTGGAAATTTT
CTAAAAAATTTAGATGGTATATTGTTTAGTGCAATAAATTCTAGTATAAGCATTAGTTATACAATTTCTATAATATTAAT
AACTCCTCTATTATTATTTTATATATTATGTAACTGGCCATCGATTGTTGAATCTGCTGATGCACTAGTTCCTGTAAAAT
ATCAAAGTATTGCTAGATTATATACAAAAAAAATAGACCAAGTAATTTCAGCTTATATTAGAGGCCAATTAAGTGTATGT
TTTATCATGGCTGTATACTACATTATATGTTTTAGTTTGGTGAAGTTAAAGTATTTTTTAATTATAGGTTTTGTATCGGG
AATCATGACTTTTATTCCATATATAGGACCTATTTCATGTGCAATATTGAGTTCCATTACAACAATGTTACAGTTTAATG
ATTGGACGATGTGTGGAGTGGTAGTGACAATGTTCATTGTTGGACAGTTAGTTGAGTCGAATATTATTACTCCATTATTA
ATAGGAAAACGGGTAGATATACATCCTATATGGATAATTATTGGAATGATAACATGTGGATCACAAATTGGATTTACAGG
GGTATTATTGTCAATTCCTATAACAGCAATAGTTGGTGTATTTGTAAGAGCACTTATAGCCCACTATATGGGTAGTAAAT
TTTATAATAATGCTGATTGA

Upstream 100 bases:

>100_bases
AGTAATAATTGTTAAATGTGGTAGAGTTTTTTAATAACCCAGGCTAGTAAGTGGATAATATATCTATGCAAAAAATACTA
AAATAGTATAATACCTAAAA

Downstream 100 bases:

>100_bases
GAAACCATTGTGATAAATATAGTTAAAGGATAAGAAAACCTATAAATATTAGTAGCTATAGTTTTATAGAGATGTGTGTT
TATAATTATCTAAAGTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MHVHRLMSDQFCKLINRYVTRSVIVLAIVLVMFVIKPVLAPCCTAMIMAYLLNPLVDKLQRFKLSRQLSVAIILLSSLCV
IIAFLVSFIPLAYSQLLSLIKFLMEKVPLIHKDSIISLLQKYNMIDYEEVSDAIKLPQASLKSLLHYENIKPLVSIFGNF
LKNLDGILFSAINSSISISYTISIILITPLLLFYILCNWPSIVESADALVPVKYQSIARLYTKKIDQVISAYIRGQLSVC
FIMAVYYIICFSLVKLKYFLIIGFVSGIMTFIPYIGPISCAILSSITTMLQFNDWTMCGVVVTMFIVGQLVESNIITPLL
IGKRVDIHPIWIIIGMITCGSQIGFTGVLLSIPITAIVGVFVRALIAHYMGSKFYNNAD

Sequences:

>Translated_379_residues
MHVHRLMSDQFCKLINRYVTRSVIVLAIVLVMFVIKPVLAPCCTAMIMAYLLNPLVDKLQRFKLSRQLSVAIILLSSLCV
IIAFLVSFIPLAYSQLLSLIKFLMEKVPLIHKDSIISLLQKYNMIDYEEVSDAIKLPQASLKSLLHYENIKPLVSIFGNF
LKNLDGILFSAINSSISISYTISIILITPLLLFYILCNWPSIVESADALVPVKYQSIARLYTKKIDQVISAYIRGQLSVC
FIMAVYYIICFSLVKLKYFLIIGFVSGIMTFIPYIGPISCAILSSITTMLQFNDWTMCGVVVTMFIVGQLVESNIITPLL
IGKRVDIHPIWIIIGMITCGSQIGFTGVLLSIPITAIVGVFVRALIAHYMGSKFYNNAD
>Mature_379_residues
MHVHRLMSDQFCKLINRYVTRSVIVLAIVLVMFVIKPVLAPCCTAMIMAYLLNPLVDKLQRFKLSRQLSVAIILLSSLCV
IIAFLVSFIPLAYSQLLSLIKFLMEKVPLIHKDSIISLLQKYNMIDYEEVSDAIKLPQASLKSLLHYENIKPLVSIFGNF
LKNLDGILFSAINSSISISYTISIILITPLLLFYILCNWPSIVESADALVPVKYQSIARLYTKKIDQVISAYIRGQLSVC
FIMAVYYIICFSLVKLKYFLIIGFVSGIMTFIPYIGPISCAILSSITTMLQFNDWTMCGVVVTMFIVGQLVESNIITPLL
IGKRVDIHPIWIIIGMITCGSQIGFTGVLLSIPITAIVGVFVRALIAHYMGSKFYNNAD

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=359, Percent_Identity=24.2339832869081, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 42464; Mature: 42464

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]