| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is lon [H]
Identifier: 88657790
GI number: 88657790
Start: 925192
End: 927600
Strand: Reverse
Name: lon [H]
Synonym: ECH_0899
Alternate gene names: 88657790
Gene position: 927600-925192 (Counterclockwise)
Preceding gene: 88658550
Following gene: 88658426
Centisome position: 78.86
GC content: 32.38
Gene sequence:
>2409_bases ATGAAAAATAAAACTTTACTACCAGTACTCACGCTACGTGATACTATAGTATTTCCTCAAGTAGTAATACCGTTATTTGT TGGAAGAGAAAGATCTATTAATGCTTTAGAGTATGCTGCTCAGCATAATAATTGTAAAATTTTATTATTAACTCAAATTG ATGGGTCTGTTGATAATCCTACTGCTGATGATTTATATAAAGTAGGAATAGTAGCAGAGGTTGTTCAATTGTTAAGGCTT CCTGATGGTGCTGTCAAAATTTTAATCAAAGGAGAAAGTAGAGCTAAAGCGCTAGAAATTATTGAAGATAATCTGTTTTT TAAAGCATATGTATCTGTTGTACGTGAGGATACAGATTTAGTAATTGATGATAAACTTGAGGCATTAAAAAGATCAGTAT TAAGTGAATTTGATAATTGGAATAAATTGAGCAAAAAAATACAAGCAGAAGCTGCAGCATCAATTTATGATATGAAAGAA TTAAGTCACTTAGCAGATATTATAGCTTCACATCTAAGTATAAAGATTTCAGATAAACAGATAGTTCTTGAAACTTTCAA TGTGACTAAAAGATTAGAGAAAATATATGACTTCTTAAAGCTAGAAATTAGTGTATTAAATGTTCAAAAGAAAATCCGTA ACCGTGTTAAATCTCAGTTTGAAACGACTCAAAAAGTGTATTATTTAAATGAGCAGTTAAAAGCTATACAAAAAGAACTA GAGGAAAGTGATAGTTCTAGCGTAGACATAGACTCTGCTAGCGAATTTGAGAAGAGAATAAATTCTACACCACTATCTGA TGAAGCTAAAGAACGTCTTATGACCGATTTAAAGAGATATAAAAAGATGAATTTTATGTCTCCTGAAGCTAATATAATAT CTAGCTATCTTCATTGGGTTCTTGATTTGCCATGGGGTAAATATTCAAATTCAAAAATTAACATGAGTAATTCCATAAAA ATTTTAGATAATAATCATTATGGAATGGATAAAATAAAAGAAAGAATTTTGGAATTTTTAGCTGTTTTAAAGCGTCTTAA AAAGCCTAAAGGCCCTATATTATGTTTAGTTGGACCTCCTGGTGTGGGTAAAACATCGCTTGCTAGGTCAATTGCTGAGG CAACGGGTAGAAATTTTATACATATGTCTTTAGGGGGAATACATGATGAATCAGAAATAAGGGGACATCGTAGAACTTAC GTAGGGGCGATGCCAGGTAAGATTATTAAAGAAATGAAGAAAGCAAAAACATGTAATCCCTTATTCCTTTTAGATGAAAT AGATAAAATAGGTTCTGATTTCCGAGGAGATCCTACAGCTGCATTGCTTGAGGTATTAGATCCTGAGCATAATAAGCATT TTGTTGATCACTACATAGAGGTAGAGTTTGATCTTTCGAATGTTATGTTTATTGCGACAGCAAATACTTTAAACTTAAGT AAGCCGTTAATTGACCGTATGGAGATAATCAATATATCTGGATATACGGAGAATGAGAAGTTAGAAATTGCTAAAACGCA TCTAATACCAAAGTTATATAAAGATCATGGGTTACAGGAAAAAGAATGGAGCATTTCTGATAATGCAATATATCATCTTA TAAGGATGTATACTAGAGAAAGTGGTGTACGAAGTTTTAAGAGAGAGATTGCTAGCCTTATGAGGAAAGCAGTAAAGGAA ATATTAGTTAATAAGGAAGTAAAAAGTATCTGTGTAGATATGGATAATATCGAAAAGTATGCAGGTGTGCGAAAATTTTC TTTCGGTGTAATAGAAGAAGAAGATCTAGTAGGTATGGTTACAGGGTTAGCCTATACTGATTCAGGAGGGGATATATTAA CAATAGAATCGGTGTTAATGTCTGGTAAAGGTGAAGTAAAATATACTGGTAAGTTAGGTGAAATAATGCAGGAATCTGTC AAAGCTGCATATAGTTATGTACGTTCTAGATGCTTAAATTTTGGAATAAATCCTAAGAAGTTTTTAGAAAATGATATACA TGTTCATGTTCCTGAGGGTGCTGTTCCTAAAGATGGTCCATCAGCAGGGATAGCTATGTGTACTTCTATTGTATCATTGA TGACTAATATTCCAGTAAAGAATACTGTTGCTATGACTGGTGAAGTAACTTTAAGGGGAAGAGTTCTTCCTATTGGTGGT TTACGTGAAAAGTTATTAGCTGCATTAAGAAGTGGTATCAAAACTGTTATATTACCATCTAGAAATGAAAAAGATATTGT AGAGATTCCAGATAATATTAAGGAAGGATTAGAACTAGTTTTTGTATCTAATGTTGATGAAGTAATTAGTGCAGCCTTAA CGCGGCAGATTGTTGATATTGTAAAGCAAGATCACATTGTAACGCAGGATATGGTTGAAATTGATGATTTAGATGCAGTG CAACATTAG
Upstream 100 bases:
>100_bases CCCTGGAAGTTCTGATGTGAATCAAGTAGTAATTAGTAAGGAGATGGTTGAAGAGTTGATGGTAAGCTCGCACTTATTTT TAAAACATTAAAGGTATTAT
Downstream 100 bases:
>100_bases AGTGCATGTATATTTTGCTTATGAATATTGATTTTGATTGTCGTTTTAGTATTGTAATAAGTAACTTATAAGTTAAATGA TAAGTAGTGATATCATACAA
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 802; Mature: 802
Protein sequence:
>802_residues MKNKTLLPVLTLRDTIVFPQVVIPLFVGRERSINALEYAAQHNNCKILLLTQIDGSVDNPTADDLYKVGIVAEVVQLLRL PDGAVKILIKGESRAKALEIIEDNLFFKAYVSVVREDTDLVIDDKLEALKRSVLSEFDNWNKLSKKIQAEAAASIYDMKE LSHLADIIASHLSIKISDKQIVLETFNVTKRLEKIYDFLKLEISVLNVQKKIRNRVKSQFETTQKVYYLNEQLKAIQKEL EESDSSSVDIDSASEFEKRINSTPLSDEAKERLMTDLKRYKKMNFMSPEANIISSYLHWVLDLPWGKYSNSKINMSNSIK ILDNNHYGMDKIKERILEFLAVLKRLKKPKGPILCLVGPPGVGKTSLARSIAEATGRNFIHMSLGGIHDESEIRGHRRTY VGAMPGKIIKEMKKAKTCNPLFLLDEIDKIGSDFRGDPTAALLEVLDPEHNKHFVDHYIEVEFDLSNVMFIATANTLNLS KPLIDRMEIINISGYTENEKLEIAKTHLIPKLYKDHGLQEKEWSISDNAIYHLIRMYTRESGVRSFKREIASLMRKAVKE ILVNKEVKSICVDMDNIEKYAGVRKFSFGVIEEEDLVGMVTGLAYTDSGGDILTIESVLMSGKGEVKYTGKLGEIMQESV KAAYSYVRSRCLNFGINPKKFLENDIHVHVPEGAVPKDGPSAGIAMCTSIVSLMTNIPVKNTVAMTGEVTLRGRVLPIGG LREKLLAALRSGIKTVILPSRNEKDIVEIPDNIKEGLELVFVSNVDEVISAALTRQIVDIVKQDHIVTQDMVEIDDLDAV QH
Sequences:
>Translated_802_residues MKNKTLLPVLTLRDTIVFPQVVIPLFVGRERSINALEYAAQHNNCKILLLTQIDGSVDNPTADDLYKVGIVAEVVQLLRL PDGAVKILIKGESRAKALEIIEDNLFFKAYVSVVREDTDLVIDDKLEALKRSVLSEFDNWNKLSKKIQAEAAASIYDMKE LSHLADIIASHLSIKISDKQIVLETFNVTKRLEKIYDFLKLEISVLNVQKKIRNRVKSQFETTQKVYYLNEQLKAIQKEL EESDSSSVDIDSASEFEKRINSTPLSDEAKERLMTDLKRYKKMNFMSPEANIISSYLHWVLDLPWGKYSNSKINMSNSIK ILDNNHYGMDKIKERILEFLAVLKRLKKPKGPILCLVGPPGVGKTSLARSIAEATGRNFIHMSLGGIHDESEIRGHRRTY VGAMPGKIIKEMKKAKTCNPLFLLDEIDKIGSDFRGDPTAALLEVLDPEHNKHFVDHYIEVEFDLSNVMFIATANTLNLS KPLIDRMEIINISGYTENEKLEIAKTHLIPKLYKDHGLQEKEWSISDNAIYHLIRMYTRESGVRSFKREIASLMRKAVKE ILVNKEVKSICVDMDNIEKYAGVRKFSFGVIEEEDLVGMVTGLAYTDSGGDILTIESVLMSGKGEVKYTGKLGEIMQESV KAAYSYVRSRCLNFGINPKKFLENDIHVHVPEGAVPKDGPSAGIAMCTSIVSLMTNIPVKNTVAMTGEVTLRGRVLPIGG LREKLLAALRSGIKTVILPSRNEKDIVEIPDNIKEGLELVFVSNVDEVISAALTRQIVDIVKQDHIVTQDMVEIDDLDAV QH >Mature_802_residues MKNKTLLPVLTLRDTIVFPQVVIPLFVGRERSINALEYAAQHNNCKILLLTQIDGSVDNPTADDLYKVGIVAEVVQLLRL PDGAVKILIKGESRAKALEIIEDNLFFKAYVSVVREDTDLVIDDKLEALKRSVLSEFDNWNKLSKKIQAEAAASIYDMKE LSHLADIIASHLSIKISDKQIVLETFNVTKRLEKIYDFLKLEISVLNVQKKIRNRVKSQFETTQKVYYLNEQLKAIQKEL EESDSSSVDIDSASEFEKRINSTPLSDEAKERLMTDLKRYKKMNFMSPEANIISSYLHWVLDLPWGKYSNSKINMSNSIK ILDNNHYGMDKIKERILEFLAVLKRLKKPKGPILCLVGPPGVGKTSLARSIAEATGRNFIHMSLGGIHDESEIRGHRRTY VGAMPGKIIKEMKKAKTCNPLFLLDEIDKIGSDFRGDPTAALLEVLDPEHNKHFVDHYIEVEFDLSNVMFIATANTLNLS KPLIDRMEIINISGYTENEKLEIAKTHLIPKLYKDHGLQEKEWSISDNAIYHLIRMYTRESGVRSFKREIASLMRKAVKE ILVNKEVKSICVDMDNIEKYAGVRKFSFGVIEEEDLVGMVTGLAYTDSGGDILTIESVLMSGKGEVKYTGKLGEIMQESV KAAYSYVRSRCLNFGINPKKFLENDIHVHVPEGAVPKDGPSAGIAMCTSIVSLMTNIPVKNTVAMTGEVTLRGRVLPIGG LREKLLAALRSGIKTVILPSRNEKDIVEIPDNIKEGLELVFVSNVDEVISAALTRQIVDIVKQDHIVTQDMVEIDDLDAV QH
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI21396489, Length=623, Percent_Identity=41.4125200642055, Blast_Score=506, Evalue=1e-143, Organism=Homo sapiens, GI31377667, Length=792, Percent_Identity=36.6161616161616, Blast_Score=476, Evalue=1e-134, Organism=Escherichia coli, GI1786643, Length=771, Percent_Identity=52.1400778210117, Blast_Score=830, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=651, Percent_Identity=40.5529953917051, Blast_Score=460, Evalue=1e-129, Organism=Caenorhabditis elegans, GI17556486, Length=656, Percent_Identity=37.0426829268293, Blast_Score=424, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6319449, Length=691, Percent_Identity=39.5079594790159, Blast_Score=484, Evalue=1e-137, Organism=Drosophila melanogaster, GI24666867, Length=632, Percent_Identity=42.7215189873418, Blast_Score=487, Evalue=1e-137, Organism=Drosophila melanogaster, GI221513036, Length=632, Percent_Identity=42.7215189873418, Blast_Score=486, Evalue=1e-137,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 90211; Mature: 90211
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKTLLPVLTLRDTIVFPQVVIPLFVGRERSINALEYAAQHNNCKILLLTQIDGSVDNP CCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCC TADDLYKVGIVAEVVQLLRLPDGAVKILIKGESRAKALEIIEDNLFFKAYVSVVREDTDL CHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCE VIDDKLEALKRSVLSEFDNWNKLSKKIQAEAAASIYDMKELSHLADIIASHLSIKISDKQ EEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCE IVLETFNVTKRLEKIYDFLKLEISVLNVQKKIRNRVKSQFETTQKVYYLNEQLKAIQKEL EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EESDSSSVDIDSASEFEKRINSTPLSDEAKERLMTDLKRYKKMNFMSPEANIISSYLHWV HHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LDLPWGKYSNSKINMSNSIKILDNNHYGMDKIKERILEFLAVLKRLKKPKGPILCLVGPP HCCCCCCCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC GVGKTSLARSIAEATGRNFIHMSLGGIHDESEIRGHRRTYVGAMPGKIIKEMKKAKTCNP CCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCHHHEECCCCHHHHHHHHHHCCCCC LFLLDEIDKIGSDFRGDPTAALLEVLDPEHNKHFVDHYIEVEFDLSNVMFIATANTLNLS EEEHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCC KPLIDRMEIINISGYTENEKLEIAKTHLIPKLYKDHGLQEKEWSISDNAIYHLIRMYTRE HHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH SGVRSFKREIASLMRKAVKEILVNKEVKSICVDMDNIEKYAGVRKFSFGVIEEEDLVGMV HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHCCHHHCCCCCCCCHHHHHH TGLAYTDSGGDILTIESVLMSGKGEVKYTGKLGEIMQESVKAAYSYVRSRCLNFGINPKK HHEEEECCCCCEEEHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH FLENDIHVHVPEGAVPKDGPSAGIAMCTSIVSLMTNIPVKNTVAMTGEVTLRGRVLPIGG HHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEECCH LREKLLAALRSGIKTVILPSRNEKDIVEIPDNIKEGLELVFVSNVDEVISAALTRQIVDI HHHHHHHHHHCCCEEEEECCCCCCCCEECCHHHHCCCEEEEECCHHHHHHHHHHHHHHHH VKQDHIVTQDMVEIDDLDAVQH HHHCCCHHHHHHHHHCHHHCCC >Mature Secondary Structure MKNKTLLPVLTLRDTIVFPQVVIPLFVGRERSINALEYAAQHNNCKILLLTQIDGSVDNP CCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCC TADDLYKVGIVAEVVQLLRLPDGAVKILIKGESRAKALEIIEDNLFFKAYVSVVREDTDL CHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCE VIDDKLEALKRSVLSEFDNWNKLSKKIQAEAAASIYDMKELSHLADIIASHLSIKISDKQ EEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCE IVLETFNVTKRLEKIYDFLKLEISVLNVQKKIRNRVKSQFETTQKVYYLNEQLKAIQKEL EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EESDSSSVDIDSASEFEKRINSTPLSDEAKERLMTDLKRYKKMNFMSPEANIISSYLHWV HHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LDLPWGKYSNSKINMSNSIKILDNNHYGMDKIKERILEFLAVLKRLKKPKGPILCLVGPP HCCCCCCCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC GVGKTSLARSIAEATGRNFIHMSLGGIHDESEIRGHRRTYVGAMPGKIIKEMKKAKTCNP CCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCHHHEECCCCHHHHHHHHHHCCCCC LFLLDEIDKIGSDFRGDPTAALLEVLDPEHNKHFVDHYIEVEFDLSNVMFIATANTLNLS EEEHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCC KPLIDRMEIINISGYTENEKLEIAKTHLIPKLYKDHGLQEKEWSISDNAIYHLIRMYTRE HHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH SGVRSFKREIASLMRKAVKEILVNKEVKSICVDMDNIEKYAGVRKFSFGVIEEEDLVGMV HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHCCHHHCCCCCCCCHHHHHH TGLAYTDSGGDILTIESVLMSGKGEVKYTGKLGEIMQESVKAAYSYVRSRCLNFGINPKK HHEEEECCCCCEEEHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH FLENDIHVHVPEGAVPKDGPSAGIAMCTSIVSLMTNIPVKNTVAMTGEVTLRGRVLPIGG HHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEECCH LREKLLAALRSGIKTVILPSRNEKDIVEIPDNIKEGLELVFVSNVDEVISAALTRQIVDI HHHHHHHHHHCCCEEEEECCCCCCCCEECCHHHHCCCEEEEECCHHHHHHHHHHHHHHHH VKQDHIVTQDMVEIDDLDAVQH HHHCCCHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA