| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88657762
Identifier: 88657762
GI number: 88657762
Start: 1011709
End: 1013091
Strand: Reverse
Name: 88657762
Synonym: ECH_0989
Alternate gene names: NA
Gene position: 1013091-1011709 (Counterclockwise)
Preceding gene: 88657933
Following gene: 88658151
Centisome position: 86.13
GC content: 27.19
Gene sequence:
>1383_bases GTGCTTAATATCATTAATGGTGAAATACGGGATAAGTATTTTATTGAAAACGAACAGGATATGAATTTATCGAAAGTTAT ATCATGTATGGTTAAGTATAAGAAATCTCAAGTATACCTTGTATTAAATCATTCTGATCAAATTTATACTGAACATGTAA TGCCTACATATAGTGGAATTATTGCTAGGTCTTTAGTCAAAATGAATCTTAGTAACATTATGAGTGATTGTGATGTAGGT TCTGCATTTTTGTTAACAAAACCAGATACTTCAGATAAAAACTGGCATTACATGGTTGTAACAAGTCAACTAAACAGTTT ATCTAAGAAACTGTTGGAAATTATTACTGATAATTTGTGTAACTTTTGTGGAATATTATTATTACCAATAGAGTTGTCAT ATCTTTGTGAGAAATTGCTAAAACTTCAAGGTAAGGGTGATGGAGAATGGACTATATTAATAGTTTATACTAAAACAAAT GATTTTAGACAAATCGTTTTGTATAAAGGCAAAATGATACATGTGAGTAATATTATTGTAGCTGCAGATGAAGTATTGCC AAGTATTATTGCAGGTAAAGTTTATCAGGAAATATCTGATACAATTTTATATCTTACGAAATTTGGATATAGTAAAGAAT CGACAATTGATTTGTATGTTATAACTTCTAGTAATATAAAAACTAGTTTGTTGTTATTTGATTTTAAGAATATAGATGCG AATATTTTTACACCGTATGAATTGTCAAAAATTTTGATGTTAAAGCAATCTTCAAATGTCATGAGTGAATTTTGTGATAC TGTAGTGTTATGTGCCATGACAGAAAAAAAACCGTTAAAAATCTTTCATACGAGGAGTACTAGTTTATTTTGTAAGATTT CCTTCTTTAATAAGTATTTTATACCTTCTTTATTATGTTTTATTGCATTGATGTCTTTGTTGAATGTTACTTATATATTT AATATAAATAATAATTATGATGAGAGCATTAATTTACTACTTCGTAAGGAGGAATTAGTATCTCGAGTTGAGAAAATTAA TCAAGATACTCAAGTAAAGCAAGTTAGTGAAATGTATGAAACAATAGATGTATATAAACTTCTTTTAGCAGATGATTTTT TTTCTTTTGACTTGATTTTACGTTTACGAAAAATAGATTTGAAAGGTTTTAAAATCAATTACTTGTCATTTAGTACGAAT AGTCATGGTGTAGCAGTAAAGTTGTTACTGAAATTTGTAGAGGAAAAGCAATTTTCATATTATTTTAACAGCTTAAAAGA TAGAATAATAGAGGAGTTTGGAGATTATAAAGTGGAAGTAATAGATACTGCTCCTAATGTTTTGGATAGTCAAAGAATTG TTGTGATAAAACTGGAGAAGTAA
Upstream 100 bases:
>100_bases CTAGCGTAAATACTATAAATTTTGTGTAAAGATAATGTCATTTTTTTCTAAAATGTCTAAAAATAGAATCATTATATCTG TCGGGGATAATGGGTCTGTA
Downstream 100 bases:
>100_bases TGTAATGAACAAAAAATTGTTAAGAAGATATTGCATAACCAAGATATCTGTATGTGTGATATTGTTGGTTGTTTTATCTA TGACATTACATTATTTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MLNIINGEIRDKYFIENEQDMNLSKVISCMVKYKKSQVYLVLNHSDQIYTEHVMPTYSGIIARSLVKMNLSNIMSDCDVG SAFLLTKPDTSDKNWHYMVVTSQLNSLSKKLLEIITDNLCNFCGILLLPIELSYLCEKLLKLQGKGDGEWTILIVYTKTN DFRQIVLYKGKMIHVSNIIVAADEVLPSIIAGKVYQEISDTILYLTKFGYSKESTIDLYVITSSNIKTSLLLFDFKNIDA NIFTPYELSKILMLKQSSNVMSEFCDTVVLCAMTEKKPLKIFHTRSTSLFCKISFFNKYFIPSLLCFIALMSLLNVTYIF NINNNYDESINLLLRKEELVSRVEKINQDTQVKQVSEMYETIDVYKLLLADDFFSFDLILRLRKIDLKGFKINYLSFSTN SHGVAVKLLLKFVEEKQFSYYFNSLKDRIIEEFGDYKVEVIDTAPNVLDSQRIVVIKLEK
Sequences:
>Translated_460_residues MLNIINGEIRDKYFIENEQDMNLSKVISCMVKYKKSQVYLVLNHSDQIYTEHVMPTYSGIIARSLVKMNLSNIMSDCDVG SAFLLTKPDTSDKNWHYMVVTSQLNSLSKKLLEIITDNLCNFCGILLLPIELSYLCEKLLKLQGKGDGEWTILIVYTKTN DFRQIVLYKGKMIHVSNIIVAADEVLPSIIAGKVYQEISDTILYLTKFGYSKESTIDLYVITSSNIKTSLLLFDFKNIDA NIFTPYELSKILMLKQSSNVMSEFCDTVVLCAMTEKKPLKIFHTRSTSLFCKISFFNKYFIPSLLCFIALMSLLNVTYIF NINNNYDESINLLLRKEELVSRVEKINQDTQVKQVSEMYETIDVYKLLLADDFFSFDLILRLRKIDLKGFKINYLSFSTN SHGVAVKLLLKFVEEKQFSYYFNSLKDRIIEEFGDYKVEVIDTAPNVLDSQRIVVIKLEK >Mature_460_residues MLNIINGEIRDKYFIENEQDMNLSKVISCMVKYKKSQVYLVLNHSDQIYTEHVMPTYSGIIARSLVKMNLSNIMSDCDVG SAFLLTKPDTSDKNWHYMVVTSQLNSLSKKLLEIITDNLCNFCGILLLPIELSYLCEKLLKLQGKGDGEWTILIVYTKTN DFRQIVLYKGKMIHVSNIIVAADEVLPSIIAGKVYQEISDTILYLTKFGYSKESTIDLYVITSSNIKTSLLLFDFKNIDA NIFTPYELSKILMLKQSSNVMSEFCDTVVLCAMTEKKPLKIFHTRSTSLFCKISFFNKYFIPSLLCFIALMSLLNVTYIF NINNNYDESINLLLRKEELVSRVEKINQDTQVKQVSEMYETIDVYKLLLADDFFSFDLILRLRKIDLKGFKINYLSFSTN SHGVAVKLLLKFVEEKQFSYYFNSLKDRIIEEFGDYKVEVIDTAPNVLDSQRIVVIKLEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53115; Mature: 53115
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNIINGEIRDKYFIENEQDMNLSKVISCMVKYKKSQVYLVLNHSDQIYTEHVMPTYSGI CCEECCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEHHHCCHHHHHH IARSLVKMNLSNIMSDCDVGSAFLLTKPDTSDKNWHYMVVTSQLNSLSKKLLEIITDNLC HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHH NFCGILLLPIELSYLCEKLLKLQGKGDGEWTILIVYTKTNDFRQIVLYKGKMIHVSNIIV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEEEEEE AADEVLPSIIAGKVYQEISDTILYLTKFGYSKESTIDLYVITSSNIKTSLLLFDFKNIDA EHHHHHHHHHHHHHHHHHHHHHEEEHHCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCC NIFTPYELSKILMLKQSSNVMSEFCDTVVLCAMTEKKPLKIFHTRSTSLFCKISFFNKYF CEECHHHHHHHHEEECCCHHHHHHHHHHEEEEECCCCCEEEEEECCCEEEEEEEHHHHHH IPSLLCFIALMSLLNVTYIFNINNNYDESINLLLRKEELVSRVEKINQDTQVKQVSEMYE HHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHEEEHHHHHHHHHHCCCCHHHHHHHHHHH TIDVYKLLLADDFFSFDLILRLRKIDLKGFKINYLSFSTNSHGVAVKLLLKFVEEKQFSY HHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH YFNSLKDRIIEEFGDYKVEVIDTAPNVLDSQRIVVIKLEK HHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEEECC >Mature Secondary Structure MLNIINGEIRDKYFIENEQDMNLSKVISCMVKYKKSQVYLVLNHSDQIYTEHVMPTYSGI CCEECCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEHHHCCHHHHHH IARSLVKMNLSNIMSDCDVGSAFLLTKPDTSDKNWHYMVVTSQLNSLSKKLLEIITDNLC HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHH NFCGILLLPIELSYLCEKLLKLQGKGDGEWTILIVYTKTNDFRQIVLYKGKMIHVSNIIV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEEEEEE AADEVLPSIIAGKVYQEISDTILYLTKFGYSKESTIDLYVITSSNIKTSLLLFDFKNIDA EHHHHHHHHHHHHHHHHHHHHHEEEHHCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCC NIFTPYELSKILMLKQSSNVMSEFCDTVVLCAMTEKKPLKIFHTRSTSLFCKISFFNKYF CEECHHHHHHHHEEECCCHHHHHHHHHHEEEEECCCCCEEEEEECCCEEEEEEEHHHHHH IPSLLCFIALMSLLNVTYIFNINNNYDESINLLLRKEELVSRVEKINQDTQVKQVSEMYE HHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHEEEHHHHHHHHHHCCCCHHHHHHHHHHH TIDVYKLLLADDFFSFDLILRLRKIDLKGFKINYLSFSTNSHGVAVKLLLKFVEEKQFSY HHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH YFNSLKDRIIEEFGDYKVEVIDTAPNVLDSQRIVVIKLEK HHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA