| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88657685
Identifier: 88657685
GI number: 88657685
Start: 898360
End: 899589
Strand: Direct
Name: 88657685
Synonym: ECH_0878
Alternate gene names: NA
Gene position: 898360-899589 (Clockwise)
Preceding gene: 88658537
Following gene: 88657983
Centisome position: 76.38
GC content: 34.63
Gene sequence:
>1230_bases ATGAATAACACACACAATACAAATAACGTTGTAAATCAAGTGCAAGACATAGCACAAGATAACCATATTTCAGACAATAA TGCCAACGAGGCTAGAGAAGTACTAGCTGCTCATGCTGCAGAAAATAACGCTAATGAAATTAGAGAAGTATTACATGACT ATTCTCTAGATGACTACGCTATAGATGACCACAACATAGGCGGTAATGCTGAAGCACAAGATGACTATTCTTTAGATGAT TATGCTATAGATGACTACAATATAGGCGGTAATGCTGAAGTACAAGATAACCATATTTCAGACAATAATACCAATGAGGC TAGAGAAGTACTACTTGCTCATGCTGCAGAAAATAACGCTAATGAAATTAGAGAAGTATTATATGACTATTCTCTAGATG ATTATGCCATAGATGACCACAATATAGATGGTAATGCTGAAGTACAAGATAACCATATTTCAGACAATAATACCAATGAG GCTAGAGAAGTACTACTTGCTCATGCTGCAGAAAATAACGCTAATGAAATTAGAGAAGTATTATATGACTATTCTCTAGA TGATTATGCCATAGATGACCACAACATAGGCGGTAATGCTGAAGCACAAGATGACTATTCTTTAGATGATTATGCTATAG ATGACTACAATATAGGCGGTAATGCTGAAGCACAAGATAACTATTCTTTAGATGATTATGCTATAGATGACTACAACATA GGCGGTAATGCTGAAGTACAAGATAACCATATTTCAGACAATAATACCAATGAGACTAGAGAAGCATTAGCTGCTCATGC TGCAGAAAATAACGCTAATGAAATTAGAGAAGTATTGTATAATTATTCTCTAGATGACTACGCTATAGATGACCACAACA TAGACGGTAATGCTGAAGTACAAGATAACCATATTTCAGACAATAATACCAATGAGACTAGAGAAGCACTAGCTGCTCAT GCTGCAGAAAATAACGCTAATGAAATTAGAGAAGTATTGTATAATTATTCTCTAGATGACTACGCTATAGATGACCACAA CATAGACGGTAATGCTGAAGTACAAGATAACCATATTTCAGACAATAATACCAATGAGGCTAGAGAGGCACAAGTTAATG AAGAGTTGGATAACGTAAATACAACTGCTAATACACAAAATATCAATGAACGATTAGAACATTGTCACATTTCGCAGACA AATCTACACAAACACACTTTTCAAAAATAA
Upstream 100 bases:
>100_bases AATATTATTGACTTATATATTAGGAAGTATTAATATAACAATATATTATTTTTTTTAATAATTATTAACTATATAACTAC ACAAATGAAGAAACATTATG
Downstream 100 bases:
>100_bases CATTAAAAAATCAATATACTAATTATACAAACGTATAGTTAGTATATTGAAACCTTGCAAAATAGCAGCATTAATGTACT TAATAAGTATAAAATGACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MNNTHNTNNVVNQVQDIAQDNHISDNNANEAREVLAAHAAENNANEIREVLHDYSLDDYAIDDHNIGGNAEAQDDYSLDD YAIDDYNIGGNAEVQDNHISDNNTNEAREVLLAHAAENNANEIREVLYDYSLDDYAIDDHNIDGNAEVQDNHISDNNTNE AREVLLAHAAENNANEIREVLYDYSLDDYAIDDHNIGGNAEAQDDYSLDDYAIDDYNIGGNAEAQDNYSLDDYAIDDYNI GGNAEVQDNHISDNNTNETREALAAHAAENNANEIREVLYNYSLDDYAIDDHNIDGNAEVQDNHISDNNTNETREALAAH AAENNANEIREVLYNYSLDDYAIDDHNIDGNAEVQDNHISDNNTNEAREAQVNEELDNVNTTANTQNINERLEHCHISQT NLHKHTFQK
Sequences:
>Translated_409_residues MNNTHNTNNVVNQVQDIAQDNHISDNNANEAREVLAAHAAENNANEIREVLHDYSLDDYAIDDHNIGGNAEAQDDYSLDD YAIDDYNIGGNAEVQDNHISDNNTNEAREVLLAHAAENNANEIREVLYDYSLDDYAIDDHNIDGNAEVQDNHISDNNTNE AREVLLAHAAENNANEIREVLYDYSLDDYAIDDHNIGGNAEAQDDYSLDDYAIDDYNIGGNAEAQDNYSLDDYAIDDYNI GGNAEVQDNHISDNNTNETREALAAHAAENNANEIREVLYNYSLDDYAIDDHNIDGNAEVQDNHISDNNTNETREALAAH AAENNANEIREVLYNYSLDDYAIDDHNIDGNAEVQDNHISDNNTNEAREAQVNEELDNVNTTANTQNINERLEHCHISQT NLHKHTFQK >Mature_409_residues MNNTHNTNNVVNQVQDIAQDNHISDNNANEAREVLAAHAAENNANEIREVLHDYSLDDYAIDDHNIGGNAEAQDDYSLDD YAIDDYNIGGNAEVQDNHISDNNTNEAREVLLAHAAENNANEIREVLYDYSLDDYAIDDHNIDGNAEVQDNHISDNNTNE AREVLLAHAAENNANEIREVLYDYSLDDYAIDDHNIGGNAEAQDDYSLDDYAIDDYNIGGNAEAQDNYSLDDYAIDDYNI GGNAEVQDNHISDNNTNETREALAAHAAENNANEIREVLYNYSLDDYAIDDHNIDGNAEVQDNHISDNNTNETREALAAH AAENNANEIREVLYNYSLDDYAIDDHNIDGNAEVQDNHISDNNTNEAREAQVNEELDNVNTTANTQNINERLEHCHISQT NLHKHTFQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45861; Mature: 45861
Theoretical pI: Translated: 3.76; Mature: 3.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNTHNTNNVVNQVQDIAQDNHISDNNANEAREVLAAHAAENNANEIREVLHDYSLDDYA CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEE IDDHNIGGNAEAQDDYSLDDYAIDDYNIGGNAEVQDNHISDNNTNEAREVLLAHAAENNA CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCH NEIREVLYDYSLDDYAIDDHNIDGNAEVQDNHISDNNTNEAREVLLAHAAENNANEIREV HHHHHHHHHCCCCCEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH LYDYSLDDYAIDDHNIGGNAEAQDDYSLDDYAIDDYNIGGNAEAQDNYSLDDYAIDDYNI HHHCCCCCEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEECCCCCC GGNAEVQDNHISDNNTNETREALAAHAAENNANEIREVLYNYSLDDYAIDDHNIDGNAEV CCCCEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEECCCCCCCCCCEE QDNHISDNNTNETREALAAHAAENNANEIREVLYNYSLDDYAIDDHNIDGNAEVQDNHIS ECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEECCCCCCCCCCEEECCCCC DNNTNEAREAQVNEELDNVNTTANTQNINERLEHCHISQTNLHKHTFQK CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHCCHHHCCC >Mature Secondary Structure MNNTHNTNNVVNQVQDIAQDNHISDNNANEAREVLAAHAAENNANEIREVLHDYSLDDYA CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEE IDDHNIGGNAEAQDDYSLDDYAIDDYNIGGNAEVQDNHISDNNTNEAREVLLAHAAENNA CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCH NEIREVLYDYSLDDYAIDDHNIDGNAEVQDNHISDNNTNEAREVLLAHAAENNANEIREV HHHHHHHHHCCCCCEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH LYDYSLDDYAIDDHNIGGNAEAQDDYSLDDYAIDDYNIGGNAEAQDNYSLDDYAIDDYNI HHHCCCCCEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEECCCCCC GGNAEVQDNHISDNNTNETREALAAHAAENNANEIREVLYNYSLDDYAIDDHNIDGNAEV CCCCEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEECCCCCCCCCCEE QDNHISDNNTNETREALAAHAAENNANEIREVLYNYSLDDYAIDDHNIDGNAEVQDNHIS ECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEECCCCCCCCCCEEECCCCC DNNTNEAREAQVNEELDNVNTTANTQNINERLEHCHISQTNLHKHTFQK CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA