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The map label for this gene is nusG [H]

Identifier: 88607731

GI number: 88607731

Start: 1093328

End: 1093888

Strand: Reverse

Name: nusG [H]

Synonym: APH_1029

Alternate gene names: 88607731

Gene position: 1093888-1093328 (Counterclockwise)

Preceding gene: 88606977

Following gene: 88606987

Centisome position: 74.35

GC content: 41.0

Gene sequence:

>561_bases
ATGAAGCATGATGGTATTGGTCACGAGTGGTACATAATCCAAGTTTCCTCGGGTAATGAGGAGAAGATATCGCAGATGAT
ACTTGAGAGGTCTATGCAGTTGGGAATGTCGGACATGTTCCGCGAAGTTTTTATTCCCTACGAAGAAGTCACCAAGATCA
AGTATAACAAGAAGGTGCAGATAAAGAAGAAATTGTCGCCAGGGTACGTATTTTTGTATATGAAACTGTGTGATGATTCT
GTGAATTTTGTGCGTAAGATTCCTAAGGTGTCCAATTTTCTCCTTGATGACTTTGGTGTACCTAAAGTGATTCCTTTGGC
TGAAATGGAAGCTATGCGCAGTCGTATGTGTCAGGGTGTTGCTAGTGATGTAGGTGATGACATTTGCGGCTTTGAAGTTG
GGGATGAGGTGGTTATTAATGACGGCCTGTTCCAGGATTTCAATGGTAAAATTGAGTACGTCAATGAAGAGAAGAAAGTT
GCTGGTGTTAGCGTGATGATTTTTGGCCGGTTAACTAAGATAGAGTTCAAATTTAGTAGTATACAGAAGGTAGGGGAATA
A

Upstream 100 bases:

>100_bases
CTGTTGGTTGTTATTCTGACTGTGGCGCTTTCGTCTGTGTTGTTTAGTTGTGTGGATTTTGTATTCTTGAGGCTTGTTAA
GGTGATGCTTGGGGTTATTT

Downstream 100 bases:

>100_bases
TTTTATGAGTAGTGCTGCGTTACTTTCGAGGATTAACCTGGTTATGGAGGCGGGGAAAGCTGCTCCTGGTCCTAAAGTGG
CTTCTGTATTGGGTCCTAGG

Product: transcription termination/antitermination factor NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKHDGIGHEWYIIQVSSGNEEKISQMILERSMQLGMSDMFREVFIPYEEVTKIKYNKKVQIKKKLSPGYVFLYMKLCDDS
VNFVRKIPKVSNFLLDDFGVPKVIPLAEMEAMRSRMCQGVASDVGDDICGFEVGDEVVINDGLFQDFNGKIEYVNEEKKV
AGVSVMIFGRLTKIEFKFSSIQKVGE

Sequences:

>Translated_186_residues
MKHDGIGHEWYIIQVSSGNEEKISQMILERSMQLGMSDMFREVFIPYEEVTKIKYNKKVQIKKKLSPGYVFLYMKLCDDS
VNFVRKIPKVSNFLLDDFGVPKVIPLAEMEAMRSRMCQGVASDVGDDICGFEVGDEVVINDGLFQDFNGKIEYVNEEKKV
AGVSVMIFGRLTKIEFKFSSIQKVGE
>Mature_186_residues
MKHDGIGHEWYIIQVSSGNEEKISQMILERSMQLGMSDMFREVFIPYEEVTKIKYNKKVQIKKKLSPGYVFLYMKLCDDS
VNFVRKIPKVSNFLLDDFGVPKVIPLAEMEAMRSRMCQGVASDVGDDICGFEVGDEVVINDGLFQDFNGKIEYVNEEKKV
AGVSVMIFGRLTKIEFKFSSIQKVGE

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=175, Percent_Identity=37.1428571428571, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 21245; Mature: 21245

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHDGIGHEWYIIQVSSGNEEKISQMILERSMQLGMSDMFREVFIPYEEVTKIKYNKKVQ
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCEEE
IKKKLSPGYVFLYMKLCDDSVNFVRKIPKVSNFLLDDFGVPKVIPLAEMEAMRSRMCQGV
EEECCCCCEEEEEEEHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
ASDVGDDICGFEVGDEVVINDGLFQDFNGKIEYVNEEKKVAGVSVMIFGRLTKIEFKFSS
HHHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCHHCCEEEEEEEEEEEEEEHHHH
IQKVGE
HHHHCC
>Mature Secondary Structure
MKHDGIGHEWYIIQVSSGNEEKISQMILERSMQLGMSDMFREVFIPYEEVTKIKYNKKVQ
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCEEE
IKKKLSPGYVFLYMKLCDDSVNFVRKIPKVSNFLLDDFGVPKVIPLAEMEAMRSRMCQGV
EEECCCCCEEEEEEEHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
ASDVGDDICGFEVGDEVVINDGLFQDFNGKIEYVNEEKKVAGVSVMIFGRLTKIEFKFSS
HHHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCHHCCEEEEEEEEEEEEEEHHHH
IQKVGE
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]