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The map label for this gene is 88607592

Identifier: 88607592

GI number: 88607592

Start: 445011

End: 445634

Strand: Direct

Name: 88607592

Synonym: APH_0430

Alternate gene names: NA

Gene position: 445011-445634 (Clockwise)

Preceding gene: 88606857

Following gene: 88607304

Centisome position: 30.25

GC content: 39.1

Gene sequence:

>624_bases
GTGCGGTACTTGTCCGTTGTTACTGAAAGAGCATGGCTTGCATTTTTTCTCATTGTACTTACGGTATTTATACTAATTTT
AGCATTTGATATATATTCGCTGTTTCCTACAAAGACGGATTTTAGCTTTGTAAAGTATACTGACCGGTACAGCGATGAAT
TCATGAGGATAAAGAAGCTCAGTTCGAATTTAGACGACAAGGAAGAAGATGTTTTAGCTTCGTATCTGGCGGGGGAGTAT
GTAAAACGTTATGAATCATACGTACGTGGTGACGAAGAGACCAAGCTTGGTTTTGTAAAGAATAATTCGTCACGTAAGAT
ATTTGTCGGATTCAAGAACGCGATGGAACAAGGTTCTGGGATACAAGCATTGATTTCCAAGTACAAAACAGAAGACGTAA
CTTTAGAGGCTGTGATTAATAAAGTTGAACTTTTACCACGGCACATTTCATCTATGAGCAGTGCTATTGTGGAATTTAGT
GTTGACTGTTTTGTGCAGGGAGTTTTAGTGGATACCCAATCGAGGAAGGTTCAGCTTTCTTTTGCATTATCGAACATCAG
AATAGCGGCAGCTGGGGTTATTCCATTTGAGTTCACTATTCACGCATACCAGTATATAGACTAG

Upstream 100 bases:

>100_bases
TGGGTAATCCATTTGTGGGGTATTTTGAGTGAAGGAGACTGGCGGCTGTTTTGTAGGAGAAAAGGAACAGTACTTTGAGA
AGGCACTTCGGTGGTATTTT

Downstream 100 bases:

>100_bases
CGTCTTTTGTAGCAGAACACCGCAGGTTATGGTTGGATGTTGTTTGTAACACTCAACGTGTTTATGCATTCTTGGACCTG
GCTATTTAGAAGATGATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Type IV Secretion System ; VirB8 Protein

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MRYLSVVTERAWLAFFLIVLTVFILILAFDIYSLFPTKTDFSFVKYTDRYSDEFMRIKKLSSNLDDKEEDVLASYLAGEY
VKRYESYVRGDEETKLGFVKNNSSRKIFVGFKNAMEQGSGIQALISKYKTEDVTLEAVINKVELLPRHISSMSSAIVEFS
VDCFVQGVLVDTQSRKVQLSFALSNIRIAAAGVIPFEFTIHAYQYID

Sequences:

>Translated_207_residues
MRYLSVVTERAWLAFFLIVLTVFILILAFDIYSLFPTKTDFSFVKYTDRYSDEFMRIKKLSSNLDDKEEDVLASYLAGEY
VKRYESYVRGDEETKLGFVKNNSSRKIFVGFKNAMEQGSGIQALISKYKTEDVTLEAVINKVELLPRHISSMSSAIVEFS
VDCFVQGVLVDTQSRKVQLSFALSNIRIAAAGVIPFEFTIHAYQYID
>Mature_207_residues
MRYLSVVTERAWLAFFLIVLTVFILILAFDIYSLFPTKTDFSFVKYTDRYSDEFMRIKKLSSNLDDKEEDVLASYLAGEY
VKRYESYVRGDEETKLGFVKNNSSRKIFVGFKNAMEQGSGIQALISKYKTEDVTLEAVINKVELLPRHISSMSSAIVEFS
VDCFVQGVLVDTQSRKVQLSFALSNIRIAAAGVIPFEFTIHAYQYID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23694; Mature: 23694

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLSVVTERAWLAFFLIVLTVFILILAFDIYSLFPTKTDFSFVKYTDRYSDEFMRIKKL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
SSNLDDKEEDVLASYLAGEYVKRYESYVRGDEETKLGFVKNNSSRKIFVGFKNAMEQGSG
HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEHHHHCCCCC
IQALISKYKTEDVTLEAVINKVELLPRHISSMSSAIVEFSVDCFVQGVLVDTQSRKVQLS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEEECCCCEEEEE
FALSNIRIAAAGVIPFEFTIHAYQYID
EEEEEEEEEEEECCEEEEEEEEEEECC
>Mature Secondary Structure
MRYLSVVTERAWLAFFLIVLTVFILILAFDIYSLFPTKTDFSFVKYTDRYSDEFMRIKKL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
SSNLDDKEEDVLASYLAGEYVKRYESYVRGDEETKLGFVKNNSSRKIFVGFKNAMEQGSG
HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEHHHHCCCCC
IQALISKYKTEDVTLEAVINKVELLPRHISSMSSAIVEFSVDCFVQGVLVDTQSRKVQLS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEEECCCCEEEEE
FALSNIRIAAAGVIPFEFTIHAYQYID
EEEEEEEEEEEECCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA