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The map label for this gene is 88607217

Identifier: 88607217

GI number: 88607217

Start: 135677

End: 136114

Strand: Reverse

Name: 88607217

Synonym: APH_0131

Alternate gene names: NA

Gene position: 136114-135677 (Counterclockwise)

Preceding gene: 88606743

Following gene: 88606935

Centisome position: 9.25

GC content: 48.4

Gene sequence:

>438_bases
ATGTCAGGGTCTTCGGTGGCCAATACCATAACTGTCGGTTCCTTCACCATACCGCTAATGAAGAAGATGGGGATGACACC
CGAAAAGGCAGCAGCAATAGAGGTATCAGCGGGAATAAATGGTCAGATAACCCCGCCAGTCATGGGAGCAGCAGCGTTTT
TGATGGCCGAGTTTTTAGCGCTTTCATACTCCAGTATAGTTAAGCATGCGTTTGTGCCGGCGCTAATGGTATATATAGGA
TTGCTTGTCATCGTGCATTTTGAGGCACGGAGGTTAGAAGGTAGTACTCCCGGTGTGCGCGCACCCGGTGTAGGAATTCG
AGGAGTTATACTTAGACTCTTGATAACCTCGGTTTCTGTTGTTCTCCTTTTTGGCTTCGTTCATATCGTCATTGATGGGG
TGTCTAGAGGCTGCAATACGCCGTATGCTCGCGTATAA

Upstream 100 bases:

>100_bases
ATGGTGTCTATGATGATCTGCCTGCTCAACGTCTTGTAGATGATACTAGTCCGGCGGACCAGCGAAAGCGGCCGTAATAG
GCTCGGGATTTATGGGTATG

Downstream 100 bases:

>100_bases
CCATCTCCAGTTGTATCATGTTCCTCATGCGTACTGTGAGAGTTTCTACTTGAAGGAATGTAAAATTGGGTATAGAGTTG
GAGGTTAGTTTGTTCTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Permease Protein; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; TRAP-Type Transporter Fused Permease Components; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; Inner Membrane Protein; TRAP-Type Transporter Permease Component; TRAP Transporter Membrane-Spanning Component; Permease; TRAP-Type Transport System Permease; TRAP Transporter Large Permease; TRAP Transporter 4TM/12TM Fusion Family; TRAP-Type Transporter Fused Permeases; C4-Dicarboxylate Transporter; TRAP Type Transporter Protein; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Transmembrane Protein; TRAP Transporter Permease; Integral Membrane Protein; Transcriptional Regulator DeoR Family; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP Family Transporter; TRAP-Type Transporter; TRAP-Type Transport System Fused Permease Components; 4TM/12TM TRAP Transporter; TRAP-Type Transport System

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSGSSVANTITVGSFTIPLMKKMGMTPEKAAAIEVSAGINGQITPPVMGAAAFLMAEFLALSYSSIVKHAFVPALMVYIG
LLVIVHFEARRLEGSTPGVRAPGVGIRGVILRLLITSVSVVLLFGFVHIVIDGVSRGCNTPYARV

Sequences:

>Translated_145_residues
MSGSSVANTITVGSFTIPLMKKMGMTPEKAAAIEVSAGINGQITPPVMGAAAFLMAEFLALSYSSIVKHAFVPALMVYIG
LLVIVHFEARRLEGSTPGVRAPGVGIRGVILRLLITSVSVVLLFGFVHIVIDGVSRGCNTPYARV
>Mature_144_residues
SGSSVANTITVGSFTIPLMKKMGMTPEKAAAIEVSAGINGQITPPVMGAAAFLMAEFLALSYSSIVKHAFVPALMVYIGL
LVIVHFEARRLEGSTPGVRAPGVGIRGVILRLLITSVSVVLLFGFVHIVIDGVSRGCNTPYARV

Specific function: Unknown

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15186; Mature: 15055

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSSVANTITVGSFTIPLMKKMGMTPEKAAAIEVSAGINGQITPPVMGAAAFLMAEFLA
CCCCCHHHEEEECHHHHHHHHHCCCCCCHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHH
LSYSSIVKHAFVPALMVYIGLLVIVHFEARRLEGSTPGVRAPGVGIRGVILRLLITSVSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VLLFGFVHIVIDGVSRGCNTPYARV
HHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SGSSVANTITVGSFTIPLMKKMGMTPEKAAAIEVSAGINGQITPPVMGAAAFLMAEFLA
CCCCHHHEEEECHHHHHHHHHCCCCCCHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHH
LSYSSIVKHAFVPALMVYIGLLVIVHFEARRLEGSTPGVRAPGVGIRGVILRLLITSVSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VLLFGFVHIVIDGVSRGCNTPYARV
HHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA