Click here to switch to the map view.

The map label for this gene is 88607058

Identifier: 88607058

GI number: 88607058

Start: 179245

End: 179928

Strand: Reverse

Name: 88607058

Synonym: APH_0179

Alternate gene names: NA

Gene position: 179928-179245 (Counterclockwise)

Preceding gene: 88607613

Following gene: 88607490

Centisome position: 12.23

GC content: 43.42

Gene sequence:

>684_bases
GTGTCTGTTCTGTTCCTTGGAGGCTTCATGTCCAATATGCAGAGTACAAAGGCCACTGCAATTTTTGATTACTGTATGTC
ACATAAAATCAACTGCACGGTTTTTGACTATTTTGGTCATGGAAATTCAAGTGCGGCTTTTAAAGACTGTACGCTTAGTT
GCTGGAAGCAGTGCTGTGACCACGTGGTTGAGTTGTTGACGGAAACTCCTCTTGTATTAGTGGGATCTAGCATGGGGGGA
TGGTTAGCGTTACTGACAGCTCTGTCTTTCCCGGAAAGAGTTAAGGGATTAGTGGGGTTGGCTCCTGCGCCGGACTTCAC
TGAAACCATTGACATGTCAGAAGAGGAAAAGGCTCATCTTGCATCTGCAGGTTATGTAGAACTACGCAGCAAAGAAGATT
GCAGCCACATCATAACACAAAAGTTATTACTAGATGGAAAGAATCATCTACTGCTCAATAAGCCTGAGATACCATTGGAT
TGTCCAATAGTTTTGATACACGGTATGGCTGATGTTCTTGTACCTTACCAGACTTCAGTAGCTATAGCTGAAAAAGTTCG
GTCGAACAATGTAGAAGTTCATCTGATTAAAGATGGTGACCACGGACTTCATGACTCCAAAGCTTTGCCAATTGTCCTGG
GATATATAGGTAAAATGGTGTCTCCGGTAGAGGCTTCTCTGTAG

Upstream 100 bases:

>100_bases
AGCATATATCAGACTACTAGGCAATATGCATACAGAAAAGATTCTTAGGCTGGATGACAGCTCGTACATAGCTTATAAGC
AGTTGGATTTTGGCGGAAAG

Downstream 100 bases:

>100_bases
TTATTGTGAAATTTCACAAATTTGCGTGTGCTGCGTAATTTTGTCTGGAAGTGAAACTATGTGGTGTGTGTTTACTTGCA
CATTTCTAGTGTATAGTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSVLFLGGFMSNMQSTKATAIFDYCMSHKINCTVFDYFGHGNSSAAFKDCTLSCWKQCCDHVVELLTETPLVLVGSSMGG
WLALLTALSFPERVKGLVGLAPAPDFTETIDMSEEEKAHLASAGYVELRSKEDCSHIITQKLLLDGKNHLLLNKPEIPLD
CPIVLIHGMADVLVPYQTSVAIAEKVRSNNVEVHLIKDGDHGLHDSKALPIVLGYIGKMVSPVEASL

Sequences:

>Translated_227_residues
MSVLFLGGFMSNMQSTKATAIFDYCMSHKINCTVFDYFGHGNSSAAFKDCTLSCWKQCCDHVVELLTETPLVLVGSSMGG
WLALLTALSFPERVKGLVGLAPAPDFTETIDMSEEEKAHLASAGYVELRSKEDCSHIITQKLLLDGKNHLLLNKPEIPLD
CPIVLIHGMADVLVPYQTSVAIAEKVRSNNVEVHLIKDGDHGLHDSKALPIVLGYIGKMVSPVEASL
>Mature_226_residues
SVLFLGGFMSNMQSTKATAIFDYCMSHKINCTVFDYFGHGNSSAAFKDCTLSCWKQCCDHVVELLTETPLVLVGSSMGGW
LALLTALSFPERVKGLVGLAPAPDFTETIDMSEEEKAHLASAGYVELRSKEDCSHIITQKLLLDGKNHLLLNKPEIPLDC
PIVLIHGMADVLVPYQTSVAIAEKVRSNNVEVHLIKDGDHGLHDSKALPIVLGYIGKMVSPVEASL

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI8923001, Length=222, Percent_Identity=34.6846846846847, Blast_Score=137, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24690; Mature: 24559

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLFLGGFMSNMQSTKATAIFDYCMSHKINCTVFDYFGHGNSSAAFKDCTLSCWKQCCD
CEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH
HVVELLTETPLVLVGSSMGGWLALLTALSFPERVKGLVGLAPAPDFTETIDMSEEEKAHL
HHHHHHHCCCEEEEECCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHCCCCCHHHHHH
ASAGYVELRSKEDCSHIITQKLLLDGKNHLLLNKPEIPLDCPIVLIHGMADVLVPYQTSV
HCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCHHHHHCCCCHHH
AIAEKVRSNNVEVHLIKDGDHGLHDSKALPIVLGYIGKMVSPVEASL
HHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHCC
>Mature Secondary Structure 
SVLFLGGFMSNMQSTKATAIFDYCMSHKINCTVFDYFGHGNSSAAFKDCTLSCWKQCCD
EEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH
HVVELLTETPLVLVGSSMGGWLALLTALSFPERVKGLVGLAPAPDFTETIDMSEEEKAHL
HHHHHHHCCCEEEEECCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHCCCCCHHHHHH
ASAGYVELRSKEDCSHIITQKLLLDGKNHLLLNKPEIPLDCPIVLIHGMADVLVPYQTSV
HCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCHHHHHCCCCHHH
AIAEKVRSNNVEVHLIKDGDHGLHDSKALPIVLGYIGKMVSPVEASL
HHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA