| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is gpmI
Identifier: 88606919
GI number: 88606919
Start: 401407
End: 402897
Strand: Direct
Name: gpmI
Synonym: APH_0389
Alternate gene names: 88606919
Gene position: 401407-402897 (Clockwise)
Preceding gene: 88607334
Following gene: 88607190
Centisome position: 27.28
GC content: 44.94
Gene sequence:
>1491_bases ATGTCTGGGAGCAACGTAGTACTCTGTATACTTGACGGATGGGGTAATGGTAGTGGTGGTCGTTATGATGCTATTCATGC GGCGTATACGCCATTCTGGGACACTGCGGTTTCATGCTGTCCTATGAGTAGTTTGTCTGCTAGTGGAACGGATGTCGGAT TGCCTTCAGGTCAGGTCGGGAATTCAGAAGTAGGGCACATAAGTATAGGATGCGGCAGGATAGTGCTTCAGGATCTGTTG AGAATTAATCTTGAGATTAATGAGGTTCACAAGAATCCTAAATTGTTGGACTTTGTGCGCGATATACAGGCGAAGGGTGG GGTATGCCACATGATTGGTCTGCTTTCTGATGGTGGAGTGCATTCTCTTCAGGCGCACATGGAAACCATTATTGAGGTTA TCACCGGATTTGGCATCAAGGTTTTTATACATGTAATTCTAGATGGTAGGGATGTTCCACCGCGTTCTGCTGAGAAGTAT ATCGGTATGCTGAACGCTAAAATTGAGCACTTAAATGCCGAAATTGCTACTGTTGCAGGGCGTTACTATGCTATGGATAG GGATAATCGCCTGGATAGGACATGTAAAGCTTATGATGCAATAGCGTATGCTACAGGGCCGAGAAGCGGCAGTGCAATGG AGGCTTTAGAAAAAAGCTACAATAGTGGAGTTACTGATGAGTTTATGGTACCTACGGTCATAGGCGATTATGATGGTATG GGTGCGGAGGATGGTGTATTATTCACTAACTTCCGGAATGACCGTGTCTTGCAATTGCTAGGTATGTTGTTGCATAGGTT TCCAGAGGTCAGTAACGTGCTGGGTATGCGGCAGTACTCGGAGAAGATGCGTATTGCTAGTCTATTTCCTCCTAGAGAGA TACATAGAAGTTTAGGTGAGGTTATTTCCGAGCGCGGGCTTAAGCAGCTGCGTATTGCTGAAACTGAGAAGTTTGCTCAC GTAACGTTCTTTTTTAACGGGGGTAGGGAAGAGCCTTTTACAGGGGAAGATAGGATAATAATACCGTCGCCTGATGTTAG TACGTATGACTTGAAGCCTGAAATGTCAGCTGTGGAGATAACTGATTCGTTGGTAGAGCGCATAAATTCTCAGCAATATG CATTGACGGTGGTTAATTATGCAAACGCTGACATGGTTGGGCATACCGGTAATATGGAAGCAGCTAAAAAAGCGGTTACT ACTGTAGATAGTTGCTTACAGAGGGTGTTTTATGCTGCAGTAAACGCGGGAGCTGTTATGCTGATAACTGCTGACCATGG AAATGCTGAGAAGATGTTTGATGTGCAAAATGATTCACCATTTACTGCACATACATCAAGTATGGTTCCGTTTGTGGTAT GCAACGCTGATGGTGATATAAGCTTGTCGGATGGTAGGCTGTGTGATGTTGCTCCGACCGTTCTCGATCTTATGAATATA CCTCAGCCTAGTGATATGACAGGGTGCTCCTTGATCACCAGAAATAGCTAG
Upstream 100 bases:
>100_bases CGTATTATTTTTATGAATTATTTCGAGTATATACGATAGTTGTTTACTACCATAAATCACATAGGTAAAATCGCACTTTC ATTGAGCAACGCGGTAGCGT
Downstream 100 bases:
>100_bases TTATACCGAGGGATTGCAATCCAAATTGCGTATTGTGAGGGCCTGTTGTTGCGAAGTTATAGGACATGTAGCTTGAAACC GCCGATAAGATTGCCAGATT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MSGSNVVLCILDGWGNGSGGRYDAIHAAYTPFWDTAVSCCPMSSLSASGTDVGLPSGQVGNSEVGHISIGCGRIVLQDLL RINLEINEVHKNPKLLDFVRDIQAKGGVCHMIGLLSDGGVHSLQAHMETIIEVITGFGIKVFIHVILDGRDVPPRSAEKY IGMLNAKIEHLNAEIATVAGRYYAMDRDNRLDRTCKAYDAIAYATGPRSGSAMEALEKSYNSGVTDEFMVPTVIGDYDGM GAEDGVLFTNFRNDRVLQLLGMLLHRFPEVSNVLGMRQYSEKMRIASLFPPREIHRSLGEVISERGLKQLRIAETEKFAH VTFFFNGGREEPFTGEDRIIIPSPDVSTYDLKPEMSAVEITDSLVERINSQQYALTVVNYANADMVGHTGNMEAAKKAVT TVDSCLQRVFYAAVNAGAVMLITADHGNAEKMFDVQNDSPFTAHTSSMVPFVVCNADGDISLSDGRLCDVAPTVLDLMNI PQPSDMTGCSLITRNS
Sequences:
>Translated_496_residues MSGSNVVLCILDGWGNGSGGRYDAIHAAYTPFWDTAVSCCPMSSLSASGTDVGLPSGQVGNSEVGHISIGCGRIVLQDLL RINLEINEVHKNPKLLDFVRDIQAKGGVCHMIGLLSDGGVHSLQAHMETIIEVITGFGIKVFIHVILDGRDVPPRSAEKY IGMLNAKIEHLNAEIATVAGRYYAMDRDNRLDRTCKAYDAIAYATGPRSGSAMEALEKSYNSGVTDEFMVPTVIGDYDGM GAEDGVLFTNFRNDRVLQLLGMLLHRFPEVSNVLGMRQYSEKMRIASLFPPREIHRSLGEVISERGLKQLRIAETEKFAH VTFFFNGGREEPFTGEDRIIIPSPDVSTYDLKPEMSAVEITDSLVERINSQQYALTVVNYANADMVGHTGNMEAAKKAVT TVDSCLQRVFYAAVNAGAVMLITADHGNAEKMFDVQNDSPFTAHTSSMVPFVVCNADGDISLSDGRLCDVAPTVLDLMNI PQPSDMTGCSLITRNS >Mature_495_residues SGSNVVLCILDGWGNGSGGRYDAIHAAYTPFWDTAVSCCPMSSLSASGTDVGLPSGQVGNSEVGHISIGCGRIVLQDLLR INLEINEVHKNPKLLDFVRDIQAKGGVCHMIGLLSDGGVHSLQAHMETIIEVITGFGIKVFIHVILDGRDVPPRSAEKYI GMLNAKIEHLNAEIATVAGRYYAMDRDNRLDRTCKAYDAIAYATGPRSGSAMEALEKSYNSGVTDEFMVPTVIGDYDGMG AEDGVLFTNFRNDRVLQLLGMLLHRFPEVSNVLGMRQYSEKMRIASLFPPREIHRSLGEVISERGLKQLRIAETEKFAHV TFFFNGGREEPFTGEDRIIIPSPDVSTYDLKPEMSAVEITDSLVERINSQQYALTVVNYANADMVGHTGNMEAAKKAVTT VDSCLQRVFYAAVNAGAVMLITADHGNAEKMFDVQNDSPFTAHTSSMVPFVVCNADGDISLSDGRLCDVAPTVLDLMNIP QPSDMTGCSLITRNS
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family
Homologues:
Organism=Escherichia coli, GI1790041, Length=510, Percent_Identity=43.3333333333333, Blast_Score=396, Evalue=1e-111, Organism=Caenorhabditis elegans, GI32564249, Length=515, Percent_Identity=40, Blast_Score=362, Evalue=1e-100, Organism=Caenorhabditis elegans, GI17507741, Length=515, Percent_Identity=40, Blast_Score=361, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GPMI_ANAPZ (Q2GKV7)
Other databases:
- EMBL: CP000235 - RefSeq: YP_504994.1 - ProteinModelPortal: Q2GKV7 - SMR: Q2GKV7 - STRING: Q2GKV7 - GeneID: 3930060 - GenomeReviews: CP000235_GR - KEGG: aph:APH_0389 - NMPDR: fig|212042.5.peg.374 - TIGR: APH_0389 - eggNOG: COG0696 - HOGENOM: HBG613255 - OMA: DHGNAEL - PhylomeDB: Q2GKV7 - ProtClustDB: PRK05434 - BioCyc: APHA212042:APH_0389-MONOMER - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_01038 - InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 - Gene3D: G3DSA:3.40.720.10 - Gene3D: G3DSA:3.40.1450.10 - PIRSF: PIRSF001492 - TIGRFAMs: TIGR01307
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core; SSF64158 BPG-indep_PGM_N
EC number: =5.4.2.1
Molecular weight: Translated: 53945; Mature: 53814
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: ACT_SITE 62-62
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSNVVLCILDGWGNGSGGRYDAIHAAYTPFWDTAVSCCPMSSLSASGTDVGLPSGQVG CCCCCEEEEEEECCCCCCCCCEEEEHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC NSEVGHISIGCGRIVLQDLLRINLEINEVHKNPKLLDFVRDIQAKGGVCHMIGLLSDGGV CCCCCEEEECHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCH HSLQAHMETIIEVITGFGIKVFIHVILDGRDVPPRSAEKYIGMLNAKIEHLNAEIATVAG HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCC RYYAMDRDNRLDRTCKAYDAIAYATGPRSGSAMEALEKSYNSGVTDEFMVPTVIGDYDGM EEEEECCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCCCCCEECCEEECCCCCC GAEDGVLFTNFRNDRVLQLLGMLLHRFPEVSNVLGMRQYSEKMRIASLFPPREIHRSLGE CCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VISERGLKQLRIAETEKFAHVTFFFNGGREEPFTGEDRIIIPSPDVSTYDLKPEMSAVEI HHHHCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCEEECCCCCHHHHH TDSLVERINSQQYALTVVNYANADMVGHTGNMEAAKKAVTTVDSCLQRVFYAAVNAGAVM HHHHHHHHCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE LITADHGNAEKMFDVQNDSPFTAHTSSMVPFVVCNADGDISLSDGRLCDVAPTVLDLMNI EEEECCCCCCCEEEECCCCCCEEECCCCCEEEEECCCCCEEECCCCEEHHHHHHHHHHCC PQPSDMTGCSLITRNS CCCCCCCCCEEEECCC >Mature Secondary Structure SGSNVVLCILDGWGNGSGGRYDAIHAAYTPFWDTAVSCCPMSSLSASGTDVGLPSGQVG CCCCEEEEEEECCCCCCCCCEEEEHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC NSEVGHISIGCGRIVLQDLLRINLEINEVHKNPKLLDFVRDIQAKGGVCHMIGLLSDGGV CCCCCEEEECHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCH HSLQAHMETIIEVITGFGIKVFIHVILDGRDVPPRSAEKYIGMLNAKIEHLNAEIATVAG HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCC RYYAMDRDNRLDRTCKAYDAIAYATGPRSGSAMEALEKSYNSGVTDEFMVPTVIGDYDGM EEEEECCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCCCCCEECCEEECCCCCC GAEDGVLFTNFRNDRVLQLLGMLLHRFPEVSNVLGMRQYSEKMRIASLFPPREIHRSLGE CCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VISERGLKQLRIAETEKFAHVTFFFNGGREEPFTGEDRIIIPSPDVSTYDLKPEMSAVEI HHHHCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCEEECCCCCHHHHH TDSLVERINSQQYALTVVNYANADMVGHTGNMEAAKKAVTTVDSCLQRVFYAAVNAGAVM HHHHHHHHCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE LITADHGNAEKMFDVQNDSPFTAHTSSMVPFVVCNADGDISLSDGRLCDVAPTVLDLMNI EEEECCCCCCCEEEECCCCCCEEECCCCCEEEEECCCCCEEECCCCEEHHHHHHHHHHCC PQPSDMTGCSLITRNS CCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA