Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87201241
Identifier: 87201241
GI number: 87201241
Start: 3449113
End: 3449382
Strand: Direct
Name: 87201241
Synonym: Saro_3229
Alternate gene names: NA
Gene position: 3449113-3449382 (Clockwise)
Preceding gene: 87201237
Following gene: 87201242
Centisome position: 96.84
GC content: 66.67
Gene sequence:
>270_bases ATGCCCATCGACCTCTTCTCTTCCAGTTCGGACAGCGTCATCTCGCCCGCGGCGCGTTGCTTTGCCATCGCGCCCAGCGA CTCCGAGGAACTTCCGTTCGTCACCAAGGCGATCTACGTCGGCGAGGCGGGCAACGTCGTACTGCGCAGCCTTTCGGGCA CGGACTTCGTCACGTTCGCCAACGTGCAGGCCGGCACGATCATCGATGCCCGCGTCCGCCAGATCCGCGCCACCGGCACC TCCGCCGCCTCGATCGTGGGCCTGGCCTGA
Upstream 100 bases:
>100_bases GCAAGAAGAAATGCCGCATCGCAACAAGCAGAATCCATTTTCCTACAATATTCACACCATGCTAGCCGCCGTTCTGGTTT TGTTCAGAAAGGTTCAAGAC
Downstream 100 bases:
>100_bases TGGCGCGGCTGGGCTTCGGCTTTCGCGGCGGCAGGCGATCCGCGATGCGGGGGGGCGCCGCCGCGCGCCCCGCCCTGACC CCGGGCGATGCATGGAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MPIDLFSSSSDSVISPAARCFAIAPSDSEELPFVTKAIYVGEAGNVVLRSLSGTDFVTFANVQAGTIIDARVRQIRATGT SAASIVGLA
Sequences:
>Translated_89_residues MPIDLFSSSSDSVISPAARCFAIAPSDSEELPFVTKAIYVGEAGNVVLRSLSGTDFVTFANVQAGTIIDARVRQIRATGT SAASIVGLA >Mature_88_residues PIDLFSSSSDSVISPAARCFAIAPSDSEELPFVTKAIYVGEAGNVVLRSLSGTDFVTFANVQAGTIIDARVRQIRATGTS AASIVGLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9177; Mature: 9046
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIDLFSSSSDSVISPAARCFAIAPSDSEELPFVTKAIYVGEAGNVVLRSLSGTDFVTFA CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEECCCCCEEEEE NVQAGTIIDARVRQIRATGTSAASIVGLA CCCCCEEEHHHHHHHHCCCCCCEEEEECC >Mature Secondary Structure PIDLFSSSSDSVISPAARCFAIAPSDSEELPFVTKAIYVGEAGNVVLRSLSGTDFVTFA CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEECCCCCEEEEE NVQAGTIIDARVRQIRATGTSAASIVGLA CCCCCEEEHHHHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA