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The map label for this gene is prtR [H]

Identifier: 87200384

GI number: 87200384

Start: 2517870

End: 2518571

Strand: Reverse

Name: prtR [H]

Synonym: Saro_2371

Alternate gene names: 87200384

Gene position: 2518571-2517870 (Counterclockwise)

Preceding gene: 87200387

Following gene: 87200383

Centisome position: 70.71

GC content: 66.52

Gene sequence:

>702_bases
ATGAGCACTGACGACGACGAAAGCGGCGACGATGGCACTCGCTCGCGGCTTGTTGCGCTTGCCTCCGGGCGGGGGGTCAG
CCTTGCGTCGCTGTCCGCGCTGATCGGCCGCAACCAGACCTATCTGCAGCAGTTCGTCCGCAAGGGTAGCCCACGGAAGC
TTGAAGAAAACGACCGGCGGACGCTCGCGGAGTTCTTCGGCGTGCCCGAGAGTGATCTTGGTGCGCCGTCGCGCGGCAGT
GCACTGGTTGTCGGGCAAGGCCGCGGCATCGTTGTCCCGACGACTCGCGCTGCGCTTGCCGAATGGGCCGATATTCCGCG
CCTGCCGCTAGGAGCTTCGGCTGGCCCCGGGGCTCTGCCGGCAGAGGAAATTCCCTCCGGCCGGCTACGTTTTTCCCATC
GCTGGTTGAAAGGGCAGGGGTTGGAACCGGCCATGCTCTCGGTCATCGAGGTGGAGGGCGACTCGATGGAGCCGACCTTG
CGCGATGGAGACGAGATCCTCGTCGACCGCACGGCCCGCCCCATGCGGGCGGGCATCCACGTCATCCGGCTCGACGATAT
GCTGCTGGTGAAGCGGCTCGAGCCGGGGCCAGGGGGCATCCTGCGGGTCATTTCTGACAATGGCGCCTATCCCCGGATCG
AACGGCCAGCGCACGAAGTGGAGATCGTTGGCCGCGTGGTCTGGAAAGGGGGGCGGCTCTAG

Upstream 100 bases:

>100_bases
TGGTGCGAGCGGATCAATCGACTCGAAATAGGATTTTTCCTATGTTGACGGCAAAATCCTACATTGCTAGGAAAAGTCCT
TCGAAAGTGGAGGAAGGCGC

Downstream 100 bases:

>100_bases
GGGCGATGCGTCCTGCGCAGAAGCGGGTAGGGGGGCGATTGAGCACCAACGATGCCCGGGGCAGGAATTGTTCGGCCTTC
GCGCCAATGCAGGCGCGGTC

Product: putative phage repressor

Products: NA

Alternate protein names: Pyocin repressor protein [H]

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSTDDDESGDDGTRSRLVALASGRGVSLASLSALIGRNQTYLQQFVRKGSPRKLEENDRRTLAEFFGVPESDLGAPSRGS
ALVVGQGRGIVVPTTRAALAEWADIPRLPLGASAGPGALPAEEIPSGRLRFSHRWLKGQGLEPAMLSVIEVEGDSMEPTL
RDGDEILVDRTARPMRAGIHVIRLDDMLLVKRLEPGPGGILRVISDNGAYPRIERPAHEVEIVGRVVWKGGRL

Sequences:

>Translated_233_residues
MSTDDDESGDDGTRSRLVALASGRGVSLASLSALIGRNQTYLQQFVRKGSPRKLEENDRRTLAEFFGVPESDLGAPSRGS
ALVVGQGRGIVVPTTRAALAEWADIPRLPLGASAGPGALPAEEIPSGRLRFSHRWLKGQGLEPAMLSVIEVEGDSMEPTL
RDGDEILVDRTARPMRAGIHVIRLDDMLLVKRLEPGPGGILRVISDNGAYPRIERPAHEVEIVGRVVWKGGRL
>Mature_232_residues
STDDDESGDDGTRSRLVALASGRGVSLASLSALIGRNQTYLQQFVRKGSPRKLEENDRRTLAEFFGVPESDLGAPSRGSA
LVVGQGRGIVVPTTRAALAEWADIPRLPLGASAGPGALPAEEIPSGRLRFSHRWLKGQGLEPAMLSVIEVEGDSMEPTLR
DGDEILVDRTARPMRAGIHVIRLDDMLLVKRLEPGPGGILRVISDNGAYPRIERPAHEVEIVGRVVWKGGRL

Specific function: Represses the promoter activity of the prtN gene [H]

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF01381 HTH_3; PF00717 Peptidase_S24 [H]

EC number: NA

Molecular weight: Translated: 25112; Mature: 24981

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: PS00501 SPASE_I_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDDDESGDDGTRSRLVALASGRGVSLASLSALIGRNQTYLQQFVRKGSPRKLEENDRR
CCCCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHH
TLAEFFGVPESDLGAPSRGSALVVGQGRGIVVPTTRAALAEWADIPRLPLGASAGPGALP
HHHHHHCCCCHHCCCCCCCCEEEEECCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCC
AEEIPSGRLRFSHRWLKGQGLEPAMLSVIEVEGDSMEPTLRDGDEILVDRTARPMRAGIH
HHHCCCCCEEEEEHEECCCCCCHHHEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHCEE
VIRLDDMLLVKRLEPGPGGILRVISDNGAYPRIERPAHEVEIVGRVVWKGGRL
EEEECCEEEEHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHEECCCCC
>Mature Secondary Structure 
STDDDESGDDGTRSRLVALASGRGVSLASLSALIGRNQTYLQQFVRKGSPRKLEENDRR
CCCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHH
TLAEFFGVPESDLGAPSRGSALVVGQGRGIVVPTTRAALAEWADIPRLPLGASAGPGALP
HHHHHHCCCCHHCCCCCCCCEEEEECCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCC
AEEIPSGRLRFSHRWLKGQGLEPAMLSVIEVEGDSMEPTLRDGDEILVDRTARPMRAGIH
HHHCCCCCEEEEEHEECCCCCCHHHEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHCEE
VIRLDDMLLVKRLEPGPGGILRVISDNGAYPRIERPAHEVEIVGRVVWKGGRL
EEEECCEEEEHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8444788; 10984043 [H]